FMO13654.5prime Sequence
796 bp (555 high quality bases) assembled on 2013-08-23
> FMO13654.5prime
TCAGTCGACATGTCTAACGACAAGCGCACCATTTATGTGGGCGGCCTGGC
TGACGAGGTCACAGAGAGACTGCTGAACAATGCCTTTATACCCTTTGGGG
ATATTGCAGATATCCAAATGCCGGCGGACTACGAATCACAGCGACACCGC
GGATTCGCCTTTATAGAATACGAACAGAGCGAGGATGCGGCTGCTGCCAT
TGATAATATGAATGACTCCGAGCTCTGCGGACGCACAATTCGCGTGAACT
TGGCGAAACCAGTGCGCGTTAAGGAGGACAGTTTCAAGCCTATCTGGGCA
GATGACGACTGGTTGCAGAAGCATGCGGGAGCCACGTTGCAGCCGGAAGG
CGAACCGGAGGCAGAGAAAGGGGAAACCCCATCCACCGGGCCGGCAGTCA
TCGAAAAGGCAGAGAAACGCAATCCACAAGTCTTCTTTGACATACGGATT
GGTGGCAATGACGCCGGTCGCATTGTGATGCTCCTCCGGGCAGATGTGGT
GCCGAAGACGGCGGAAAACTTTCGGCAATTGTGCACCCACGAGCAGGGCT
ACGGCTACAAAGGCTGCTCCTTCCACCGCGTGATACCCGAGTTTATGTGT
CAAGGAGGCGACTTCACCAACAACAATGGCACCGGCGGCAAGTCCATCTA
TGGCAAAAGTTCAACGATGAGACTTCAATCTGAACACACAGTTTTGACTC
TTTCATGCCACTCGGCGCACACAATGCTCGCAGTTTTTATATGTACCCAA
ACAGATGGCTGACACAGCACGTCGTTTGCCATGTCATCATGGCGCG
FMO13654.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:38:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| cyp33-RA | 986 | CG4886-RA | 67..879 | 9..795 | 3420 | 96.4 | Plus |
| Cyp1-RA | 1227 | CG9916-RA | 302..501 | 493..689 | 370 | 80.6 | Plus |
| CG7768-RB | 679 | CG7768-RB | 166..290 | 493..617 | 190 | 78.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:38:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17545553..17545937 | 210..594 | 1880 | 99.2 | Plus |
| 2R | 25286936 | 2R | 17545288..17545489 | 9..210 | 1010 | 100 | Plus |
| 2R | 25286936 | 2R | 17545994..17546085 | 595..684 | 360 | 97.8 | Plus |
| X | 23542271 | X | 16318418..16318598 | 672..493 | 330 | 80.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:38:40 has no hits.
FMO13654.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 10:10:46 Download gff for
FMO13654.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cyp33-RA | 67..879 | 9..796 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:20:08 Download gff for
FMO13654.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| cyp33-RA | 67..879 | 9..796 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:20:08 Download gff for
FMO13654.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17545288..17545489 | 9..210 | 100 | -> | Plus |
| 2R | 17545554..17545937 | 211..594 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 10:10:46 Download gff for
FMO13654.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13432793..13432994 | 9..210 | 100 | -> | Plus |
| arm_2R | 13433059..13433442 | 211..594 | 99 | -> | Plus |
