FMO13655.5prime Sequence
973 bp (870 high quality bases) assembled on 2013-08-23
> FMO13655.5prime
TCAGTCGACATGACTCGCCACGCACGTAACTGCACGGCCGGAGCCGTGTA
CACCTACAACGAGAAGAAGCGTGACGCGGCGGAGTCCGGCTACGGCACGA
ATGCCCAGCGCCTGGGCAAGGATTCGGTGAAATCCTTCGACTGCTGCTCC
TTGACGCTGCAACCATGTCGCAGGCCAGTGATCACCAAGGATGGCTATCT
ATTCGACAAGGAGGCCATCCTGCAGTACATCGTGACCAAGAAGAACGAGT
ACAGCCGCCGACTGAAGGAGTACGAGCGTCTGCGGCGCGCGGAGGAGGAT
AAACTGAGCCAGGAGGCCAACAGCAAGCAGCAGGCGCGCATGGAGCGCTT
TGTTAATGCCGAGAAGCCAGCGATGACACCCGCCCACTCCTCGGCCGCTG
CCAGCGAGAAGCCGTCGACCTCTTCCGCCGCTGCTGCCGCTTCATCTGAA
TCCTCGTCCGCATCCTCGATATCCAACATGACCAACGGGCACGAGAAGAA
GCTGCCCAGCTTCTGGCTGCCCTCCGAGTGCCCCAATGCCGGGTTAGCCA
AGGCCCAGAAGCCCGACGCCACCATCTACTGCCCGGTGTCGCAGAAACCG
CTGCGAGTCAAGGATCTGATTGATGTGAAGTTCACGCTGCTCAAGGGACG
GCGACACGAAGCGCTCGCTGATTGCCAAGGAGGCGCGCTACATGTGCCCC
ATTACCCACGACGTGCTCAGCAACGCGGTGCCCTGCGCTGTGCTGCGTCC
CACTGGCGATGTGGTGACCATGGAGTGCGTGGAACGGCTGATCATAAGGG
ACATGATCCATCCGCTCACGGATCGCTAGCTCAAGGAGATGGACATCATT
CCCCCTGCAGCCGAGGTCGGCACTGGCTTACGCAACGACGAACGACCACC
CTCCAGGGCAAAGGTAATATCGGCCCATTGTTCCAGGTCGCAACTTTTTC
ATGACTCCATTCGGCTTGCCGGC
FMO13655.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:38:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6179-RA | 1276 | CG6179-RA | 107..1025 | 10..937 | 4295 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:38:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18380188..18380930 | 10..753 | 3670 | 99.9 | Plus |
| X | 23542271 | X | 18380991..18381091 | 754..854 | 445 | 96 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:38:44 has no hits.
FMO13655.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 10:10:47 Download gff for
FMO13655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6179-RA | 98..1006 | 1..917 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:20:11 Download gff for
FMO13655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6179-RA | 98..1006 | 1..917 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:20:11 Download gff for
FMO13655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18380179..18380930 | 1..753 | 99 | -> | Plus |
| X | 18380991..18381099 | 754..864 | 94 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 10:10:47 Download gff for
FMO13655.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18274212..18274963 | 1..753 | 99 | -> | Plus |
| arm_X | 18275024..18275132 | 754..864 | 94 | -> | Plus |
