FMO13660.5prime Sequence
938 bp (785 high quality bases) assembled on 2013-08-23
> FMO13660.5prime
TCAGTCGACATGGACGCGGAAGACGGTTTTGATCCCACTTTGCTGAAAAA
GAAGAAGAAGAAGAAGACCACGTTCGATCTGGACGCGGCATTGGGTCTGG
AGGATGACACCAAGAAGGAGGATCCCCAGGATGAGGCATCGGCGGAAGGA
GGTGCCGCCGCCGAGGAGGATAATCTAGATCTGGAGAGTTTCGGCAAGAA
GAAGAAAAAGAAGAAGAAGCCCTTCAACATGGACGAAATCGAAGCGGCCA
TACCCAGCTTTGGCGGCGATGATGTGGCCGCCAGCGAGGAGCCCGAGGAG
GAGGAGATCAATCTGGACATGGACTTCTCGATGGCCAAAAAGAAGAAGAA
GAGCAAGAAGAAGGAACTGGACGAGCTGTTTGCGGACCAAGCGGACGACG
ACAAGAGCGAAGACAAAGAGAACGACGAGGACAACAGCTCAACCTGGTTT
GGCTCCGACCGCGATTACACATACGACGAGTTGCTGAAGCGGGTCTTCGA
AATCATTCTCGACAAGAATCCGGACATGGCCCGCCGGGCCGAAAGCCAAA
GTTCGTGATGCGACCGCCGCAGGTGCTGCGCGTGGGAACCAAGAAGACCT
CCTTTGCCAACTTCATGGACATTGCGAAAACGCTGCATCGCCTGCCCAAG
CATCTGCTCGATTTCCTGCTGGCCGAGTTGGGTACCAGTGGCTCCATGGA
CGGCAACAGCAGCTGATCATCAAGGGCCGTTTCCAGCCCAAACAAGATCG
AAGAATGTGCTGCGTCGCTACATCAAGGAGTACGTCACTGTCACACCTGC
CGCTCCCCGGAAACGATATGCAGAAGACACGCGTCTCTTCTTCTGCAGTG
GCGAATCTGGTGCTCCCGCTGCTCGGTGGCAGCATAAAGTCAAGTTCAAG
CTGTCACGGCAACCTGGCCGCATAACGAAGCAAAAACA
FMO13660.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:38:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF-2beta-RA | 1128 | CG4153-RA | 129..1061 | 10..938 | 4140 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:38:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12525986..12526385 | 424..25 | 2000 | 100 | Minus |
| 3L | 28110227 | 3L | 12525204..12525678 | 896..424 | 1765 | 95.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:38:24 has no hits.
FMO13660.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 10:10:35 Download gff for
FMO13660.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF-2beta-RA | 126..1028 | 1..900 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:19:59 Download gff for
FMO13660.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF-2beta-RA | 120..1022 | 1..900 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:19:59 Download gff for
FMO13660.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12525199..12525677 | 425..900 | 96 | <- | Minus |
| 3L | 12525986..12526385 | 25..424 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 10:10:35 Download gff for
FMO13660.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12518299..12518777 | 425..900 | 96 | <- | Minus |
| arm_3L | 12519086..12519485 | 25..424 | 100 | <- | Minus |
