FMO13662.5prime Sequence
303 bp (243 high quality bases) assembled on 2013-08-23
> FMO13662.5prime
TCAGTCGACATGATGCGATTGGCGCGATTTACGCAGGGTTTCTCGTTTAA
CAAGAATGTGGCCAAGCATCGCGGCAGTGGCAGTAGCAACGGCACCGGAA
ACGGAAGCGGGACCGGAAACGGCCAGGGATTAGGTGGCAGCTGCAGTGCC
AACGGCCTGGCAGCCACTGGCGGCGTTGGAGGGGGCGGTGGGAGTGGCAG
CGGCGGCGGTGGGTGTGGCAGCGGGAGTGGCAGTGGGAGTGGCAAGCGGA
ATCAAGGCAAGACAAAGTGCTTCGGTGCAAGTGTTCGGTGTGCTCCTTGT
CGC
FMO13662.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:38:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| dnc-RS | 9576 | CG32498-RS | 1353..1640 | 10..291 | 1290 | 97.9 | Plus |
| dnc-RB | 4093 | CG32498-RB | 310..597 | 10..291 | 1290 | 97.9 | Plus |
| dnc-RU | 9456 | CG32498-RU | 1287..1520 | 64..291 | 1020 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:38:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3245071..3245257 | 65..251 | 935 | 100 | Plus |
| X | 23542271 | X | 3244798..3244854 | 10..66 | 285 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:38:58 has no hits.
FMO13662.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 10:10:53 Download gff for
FMO13662.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dnc-RB | 301..604 | 1..296 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:20:20 Download gff for
FMO13662.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| dnc-RB | 301..604 | 1..296 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:20:20 Download gff for
FMO13662.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3245073..3245310 | 67..296 | 96 | | Plus |
| X | 3244789..3244854 | 1..66 | 92 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 10:10:53 Download gff for
FMO13662.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3138822..3138887 | 1..66 | 92 | -> | Plus |
| arm_X | 3139106..3139343 | 67..296 | 96 | | Plus |
