FMO13664.5prime Sequence
516 bp (378 high quality bases) assembled on 2013-08-23
> FMO13664.5prime
TCAGTCGACATGGACAACCATCACATGCATCAGGGTCTCCTGGGTAAAGT
GGAGGCGGGTGCGGCTGCCTTTGGCGGTGTCTATTCGCGTCATCCGTACG
ATTGGCCCTTCAATGCGGTTACCCACAAGGAGGCGGCCAGCGTGAATTCC
GGCTGGTGGGACATGCACAGTGCCGCCGGATCCTGGCTGGATATGGGTGG
TGCGGGCATGCACTCAACAATGGCCAATTATGCGAGTGAGAACTATAGCT
CCGCATTGAGTCATTCGCTGTTGGGATCGGGACAACATTTGCTGCAGGAC
ACCTACAAGAGCATGTTGCCCGGCAGGGAGTTGGCGTTGGTGTGGGCGTG
GCATGGGTGGTTCTCCCTGCTCACAGTTCACCATCGGGGAGCAGCAGCTG
CGGCCCACGGCAGCGGCGGCGGGTGCTCCCCCAGGGGGTCACCATCGACC
ATCCCCAGATCCAAGGCGTAAGCCGACGGGCCATGCATATGCCGAATTGC
GAAGCGACGCTGGTCC
FMO13664.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:39:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sp1-RF | 3593 | CG1343-RF | 1500..1994 | 8..483 | 1995 | 96 | Plus |
| Sp1-RE | 3763 | CG1343-RE | 1099..1593 | 8..483 | 1995 | 96 | Plus |
| Sp1-RD | 3593 | CG1343-RD | 1500..1994 | 8..483 | 1995 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:39:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9753705..9754130 | 8..425 | 1755 | 97.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:39:02 has no hits.
FMO13664.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 10:10:54 Download gff for
FMO13664.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sp1-RD | 1490..1956 | 1..454 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:20:21 Download gff for
FMO13664.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sp1-RD | 1490..1956 | 1..454 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:20:21 Download gff for
FMO13664.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9753695..9754130 | 1..425 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 10:10:54 Download gff for
FMO13664.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9647728..9648163 | 1..425 | 97 | == | Plus |
