FMO13667.5prime Sequence
381 bp (253 high quality bases) assembled on 2013-08-23
> FMO13667.5prime
TCAGTCGACATGAAGCGAAATCGTCGTGCATTTGCTGGAAACAACAAGCC
ATTTGTCTTTGGAGGCATTTACAATCCCAATGCCACCGTCAAGCCTTTGA
TCCAAATGCCGTTGCAGGCCGCCAATGTCCAGGAGCAGCAGTCTTCTCCG
GTGGCTTTATATCCGACATCGGCCTCCCCGGTGGCTGTTCAATCGCCACA
GGACGCATTTTTGGCTGTTCAGTCGCCAGGGGCTCCTGCCCCGTTCAACT
GGCCACTCGTCCGACCAGAAAATATCCGGATGCGGAGGCATGGCCTCAAA
CTGCCCTGCCATTATCTCAAGGAGGACCCATCTCGGCACAAGACCGCCGG
CCAAAAATAAGGACATACAGTGCAGTCCATG
FMO13667.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:39:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| DIP1-RD | 2604 | CG17686-RD | 113..447 | 10..334 | 1365 | 95.8 | Plus |
| DIP1-RI | 3477 | CG17686-RI | 1049..1320 | 73..334 | 1050 | 94.9 | Plus |
| DIP1-RG | 3195 | CG17686-RG | 1121..1392 | 73..334 | 1050 | 94.9 | Plus |
| DIP1-RI | 3477 | CG17686-RI | 113..175 | 10..72 | 315 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:39:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21628557..21628754 | 268..73 | 890 | 99 | Minus |
| X | 23542271 | X | 21629974..21630036 | 72..10 | 315 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:39:11 has no hits.
FMO13667.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 10:10:58 Download gff for
FMO13667.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DIP1-RD | 114..457 | 1..334 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:20:28 Download gff for
FMO13667.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| DIP1-RD | 104..447 | 1..334 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:20:28 Download gff for
FMO13667.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21628483..21628754 | 73..334 | 94 | <- | Minus |
| X | 21629974..21630041 | 1..72 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 10:10:58 Download gff for
FMO13667.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21499510..21499781 | 73..334 | 94 | <- | Minus |
| arm_X | 21501001..21501068 | 1..72 | 93 | | Minus |
