FMO13668.5prime Sequence
820 bp (810 high quality bases) assembled on 2013-08-23
> FMO13668.5prime
TCAGTCGACATGAGTACAGTCGCAAGCAACGATCAGCACGTGGACACCGG
CGTATTGCCGGTGCCCAGCACGAACAGCCCTAGCTCCCAGATCGAGCAGA
AGGGCAATGAAGCAATCGTGCCCAACTACAAGGCTGCTACTGCCGGCGAG
CAGGGCGAGGCACAGGCTGGAGCTACCTGCACTACAGTCGCTGTTCGTCC
GTCAGGTGTTGCCACCTCTGCCGACATAGTGAAAGGGTCATCATCTGTGA
GCAGCCACGTGCAGCCGTCATGGCGGAGCTCCTTCGCCAGGTCCCAGGAC
AAGAAGTGCGGCATTTGCTTCGAGACGATCATGGAGAAGGAGGGAGGAGA
TAAGCGTTTCGGCATCCTGCCCAGCTGCAACCACGTGTTCTGCTTCCAGT
GCATTTGCACATGGCGTCATGCCACACAGTATGCCTATCAAGTGACGCGA
GCTTGCCCCGAATGTCGCGTGTGGTCTAACTTTGTATGTCCCAGTGCATT
TTGGGTGGAGGAAAAGGTGGCGAAGGACCAGCTCATCAATGATCACCTCG
CCGCTATGCGTGCAAGGGACTGCAAGTACTTTAAACAAGGACAAGGCGTG
TGCCTCTTTGGCAACAAGTGTTTTTACAAGCACTCTATACCCAACGCAGA
TTACGTCGATGTGGGATTGCCGACCCATGCTCTAGGGCTACCGATTCCAT
CAGATTTTTCGGGACTTGCAATTGTCTTATTTTGGTTCCTTTCCCGAATA
TGTTTTTTGATGATTTCAGCAATTCCGACGACTACGATTTCTCGGACGTA
ACGCAAGCTTTCTAGACCAT
FMO13668.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:39:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12477-RA | 1325 | CG12477-RA | 91..883 | 10..801 | 3940 | 99.9 | Plus |
| Mkrn1-RC | 2229 | CG7184-RC | 824..1211 | 286..673 | 860 | 81.4 | Plus |
| Mkrn1-RB | 2163 | CG7184-RB | 758..1145 | 286..673 | 860 | 81.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:39:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18722335..18723127 | 801..10 | 3915 | 99.9 | Minus |
| 3L | 28110227 | 3L | 21531808..21532032 | 673..449 | 495 | 81.3 | Minus |
| 3L | 28110227 | 3L | 21532358..21532502 | 430..286 | 395 | 84.8 | Minus |
| X | 23542271 | X | 14777334..14777576 | 286..528 | 270 | 74.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:39:15 has no hits.
FMO13668.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 10:10:59 Download gff for
FMO13668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12477-RA | 91..888 | 10..807 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:20:30 Download gff for
FMO13668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12477-RA | 91..888 | 10..807 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:20:30 Download gff for
FMO13668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18722330..18723127 | 10..807 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 10:10:59 Download gff for
FMO13668.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18715430..18716227 | 10..807 | 99 | | Minus |
