FMO13670.5prime Sequence
443 bp (280 high quality bases) assembled on 2013-08-23
> FMO13670.5prime
TCAGTCGACATGGAGGTACCACCGCCACTTGTACTCAAGCGACCGCTCTA
TGTGCCCAGCAAGACGTTGATGGGGCCCGGACCCTCCAACTGTTCCCATC
GCGTCCTGGAGGCCATGAGCAATCCGGTGTTGGGTCACATGCATCCCGAA
TGCCTGCAGATCATGGACGAGGTGAAGGAGGGCATTAAGTACATCTTTCA
GACACTCAACGATGCCACCATGTGCATCAGCGGCGCCGGCCACTCGGGCA
TGGAGGCCGCTCTGTGCATCTGATCGAAGGATGGCGATGTGGGGCTCATG
GGCATCACGGGCGTCTGGGGTCATCGGGCCGGGGATATGGCCCGTCCCTA
TGGTGCCAAATTCCTAACGGGAGGCGAGTTTCGGCGGGCATTGTCCACAA
AAAAATCCTTCCCTTCAAGGCCATCAACCAGGCCTCTCATTGC
FMO13670.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:35:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Spat-RA | 1410 | CG3926-RA | 168..557 | 9..395 | 1725 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:35:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 6529561..6529764 | 154..357 | 895 | 98 | Plus |
| X | 23542271 | X | 6529115..6529265 | 9..159 | 755 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:35:23 has no hits.
FMO13670.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 10:08:45 Download gff for
FMO13670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spat-RA | 164..564 | 3..401 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:18:05 Download gff for
FMO13670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spat-RA | 164..564 | 3..401 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:18:05 Download gff for
FMO13670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 6529111..6529265 | 3..159 | 98 | -> | Plus |
| X | 6529567..6529812 | 160..401 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 10:08:45 Download gff for
FMO13670.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 6423144..6423298 | 3..159 | 98 | -> | Plus |
| arm_X | 6423600..6423845 | 160..401 | 94 | | Plus |
