FMO13672.5prime Sequence
888 bp (461 high quality bases) assembled on 2013-08-23
> FMO13672.5prime
TCAGTCGACATGGGCAACGTGTGCAGTTCCGGCCAGAAGAAAAAGAAGGA
CAAGGACAGTGCCTCCGAAAAGTCAGACGACTCGCCTCCCTACCAGGAGG
CGGATCAGAAGGACACCCTGATCTCCGCCGACTCGAGTGCTGGTGATGGA
AAGCGGGCACCTTTGGCCGCCGTGGAGGCACTTCCGGAGGTGACACCGCT
GCCGGAGTCCAATGGCAACCAGGCGCAGGTCCAGAAGCAGCTGTCAACGG
GACCGGGGAGCAAGCCAGGTGGAGCAGAGAAGGATTCAAACAGCACCACT
CCGCAGGGGGCGCAGGCGCCCAGTGATGTGGCCAATGCCAATCCCCGGTG
CCGGAAAACCTGAGCGTGCTGCAGGGCAAGCCGCCCGCCCCGGCCGCAAG
ATTTGAGCGGGACAAAAAAAATCCGTGGGTCTACATTCTGGCGGACAAAC
AGCACCCGAGTACCAAGAAAGCACAAAGCGGGGTCGGGCACAGCCCTGTT
ACAAGCATTTTCAAGAGCAAAGTGCCCAAAGCCGCCGGCTTTGACTTTCC
TCCATCGCCGATGTGCACGACAGCGAGCCCGGAGACGGAACCCGGGCAAA
TGGCAATGCCCCGGAAGGATTCCCCCCGCCCTGCAGGGAGGGCGAAGCGG
CTGAACCCAAACGCCTCTGGGAGGCGCAGGGTGGGTCACGAGGAAGCGGG
CCAACTGCCTGTGCGAGAATCACGCGCCACTCGGCCGGAGCGTACATGAT
CCCCGTTTCTGTTCTTGGGCGCCACCCTGGGCACTTCCGATGCTTCCCCG
CTGACCATCGAGAGCAGACTATTCCCCTCGCGTGTGTGGCACCCGCCTAC
GAGAAAAAACGTTTGCTCCTTGAGAAAAATGTAAACAT
FMO13672.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:35:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10132-RB | 4570 | CG10132-RB | 272..1100 | 9..877 | 3005 | 93.1 | Plus |
| CG10132-RA | 4685 | CG10132-RA | 387..1215 | 9..877 | 3005 | 93.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:35:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19520713..19520915 | 81..283 | 1015 | 100 | Plus |
| 2L | 23513712 | 2L | 19521066..19521560 | 283..815 | 795 | 89.3 | Plus |
| 2L | 23513712 | 2L | 19520584..19520655 | 9..80 | 360 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:35:29 has no hits.
FMO13672.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 10:08:48 Download gff for
FMO13672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10132-RA | 421..1260 | 6..886 | 92 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:18:09 Download gff for
FMO13672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10132-RA | 384..1223 | 6..886 | 92 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:18:09 Download gff for
FMO13672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19520581..19520655 | 6..80 | 98 | -> | Plus |
| 2L | 19520713..19520915 | 81..283 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 10:08:48 Download gff for
FMO13672.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19520581..19520655 | 6..80 | 98 | -> | Plus |
| arm_2L | 19520713..19520915 | 81..283 | 100 | -> | Plus |
