FMO13695.5prime Sequence
1002 bp (910 high quality bases) assembled on 2013-08-23
> FMO13695.5prime
TCAGTCGACATGAGTAGTCATCGAGACGGAGCCGGAGCCGATCGTATCAC
AATCAAAATTCACAACATGAAGCGTAGCGCCTCGCGCTCCCCGGGCCCGG
CCTCCAGGAGCAGTTTGTCGCGCAACTCGCGAAGCATGGGTCGTGGGTAC
GACAACGGCAGCGGCGTGCCTGGCGATTCGCCGGAGCGCCTGTCGCCGGA
GCGCATGCGACGTCGATTGGACCGCTCGCCGAGTCGTTATGGCTCCCCGC
ACCGGGAGCCCTACATGCGTGGTCCACCGCCTGCAGAGCGACCAGCTGGC
TACAAGGTACTTTGCGTCAGTGCCCTGCCGCCAAAGGCTCCGGACGATTT
TATCGAGGAGACACTGTACCGCGAGTACAAGAAGTTTGGCGATTTTAGCG
TGCGACTGGCGCACGACTTGGATGAACGGGTTGCTTACGTTTGCTTCCGA
ACGCCTGAAGATGCACGCGAGGCGAAGCACCATAAGCCGCGCCTGATCAT
CTACGACAAGATGGCCATTGTGGAGCCGGTGTACAAGTCCACAACCAGAC
CGGAATATAGACCACGCGGTCACTCAATGTCCCCACCGGACTATGAACGT
TACCACTACTCGAGGTCCCCTATGGGACAAGGCGTTCCTTTGGATCACCG
TCGACCTCCGATTGATCCCTACGATCGGTACGGTCCTCCCCATATGCATC
CGCACGCAGTCCATCCACGTGATTACCGCCCATTGCATCATGACTATCCT
CATCCGCCACGCGGACCACCTTTGCATCGCGGCGGCCATCCGCATCACTC
CATGGCATGCGCCGCCCATCAGTATGCTCAATGAGCCATTGGCACCACGC
CCACACGCTCCCTATGAAAAGCTGAGAGCAGAGACAGTCCCCATTACTTG
CACCATGTGCAGCCGAGATGATCTCTTTCTTACGCCGCACACTGTTTGCA
GGAAATCTGGAGGTTACCATCGTCGGAACAACAGACTGGCGTCGCCATCT
TT
FMO13695.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:36:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| nito-RC | 3084 | CG2910-RC | 215..1191 | 9..972 | 4480 | 98.3 | Plus |
| nito-RA | 4001 | CG2910-RA | 215..1191 | 9..972 | 4480 | 98.3 | Plus |
| nito-RB | 3115 | CG2910-RB | 215..1191 | 9..972 | 4480 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:36:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7962842..7963393 | 9..560 | 2760 | 100 | Plus |
| 2R | 25286936 | 2R | 7963450..7963876 | 559..972 | 1400 | 93.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:36:11 has no hits.
FMO13695.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-23 10:09:13 Download gff for
FMO13695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nito-RB | 207..1201 | 1..985 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:18:34 Download gff for
FMO13695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nito-RB | 207..1201 | 1..985 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:18:34 Download gff for
FMO13695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7962834..7963393 | 1..560 | 99 | -> | Plus |
| 2R | 7963452..7963886 | 561..985 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-23 10:09:13 Download gff for
FMO13695.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3850339..3850898 | 1..560 | 99 | -> | Plus |
| arm_2R | 3850957..3851391 | 561..985 | 95 | | Plus |
