FMO13705.5prime Sequence
277 bp (277 high quality bases) assembled on 2013-08-24
> FMO13705.5prime
TCAGTCGACATGCCTCGTATAGTTCCACTGCAATTGCTGAGGTGCCTGCG
GGTGCTTTTGGACAATAATGGTGGAATTTTAAGTGCAGTGGAGGTGAAAC
GCATTTCGGGTTTGATGGCCAAGTATTCAAAAAAACTCGTCTCGAAATGT
GTGTATGTACAAATTCTGAAATCCACAAAGACGGAACTATTGGGCGACTT
TATGGCGGTGGGCGGTTGGTCGCTGGTCTACACCTGGTTAAATGATGCCA
TCAGGGCCATGAACTGGCCGCTGGTAC
FMO13705.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:41:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PNUTS-RE | 4030 | CG33526-RE | 322..589 | 10..277 | 1340 | 100 | Plus |
| PNUTS-RD | 4818 | CG33526-RD | 1110..1377 | 10..277 | 1340 | 100 | Plus |
| PNUTS-RA | 2731 | CG33526-RA | 414..681 | 10..277 | 1340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:41:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 871805..871972 | 110..277 | 840 | 100 | Plus |
| 2L | 23513712 | 2L | 871640..871738 | 12..110 | 495 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:41:06 has no hits.
FMO13705.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:45:35 Download gff for
FMO13705.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PNUTS-RA | 409..681 | 3..277 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:21:37 Download gff for
FMO13705.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PNUTS-RA | 409..681 | 3..277 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:21:37 Download gff for
FMO13705.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 871630..871738 | 1..110 | 97 | -> | Plus |
| 2L | 871806..871972 | 111..277 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:45:35 Download gff for
FMO13705.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 871630..871738 | 1..110 | 97 | -> | Plus |
| arm_2L | 871806..871972 | 111..277 | 100 | | Plus |
