FMO13715.5prime Sequence
579 bp (579 high quality bases) assembled on 2013-08-24
> FMO13715.5prime
TCAGTCGACATGGATAACTATAACCACAAGAAATTCACTGGAGCTCTGAA
GCGAAAGCGCAGCATGGATGCGGACTCTGATGACGATGTGGTCTTCATTA
TGGAACAGCCGGGCCAACGCACTCCAGAGCAGCCGCAGCCTAAGCGTCGC
TTCTTCCGACCCTGGATGGATGAGTCTCCGGAAGAGGAGCAACCACAGCC
GCCACGTAAGATTGTGGCTACATCGACACCGCCGCCACAACAAGTGGATG
GCACCTACCACGCTAACATGGTGCGCAATCACCACAAGCGCCGCCAGCGC
AGTCCACAGGAGCAACTGCGTCGGGATCGCAACACCTTGGCCAGCCTGCG
CCATCGACGCTCCCAGCAGCAACAGCAGCAGCTCATCGAACAACAATACC
TGACCAGTCGCATTCAGCACGAGGCCAATCTGCAGCAGCAGATCCGCCTG
AGTCTCTACTATGTGCGCTTCCTGCAGCAGGCGATGGCCTCCACGGAGCC
ACTGCCTCCCACACAGCCAAGGCACATGATGCCGCGCCAACAGACCACCA
CCCAGCATCCTGCAAGCTTTCTAGACCAT
FMO13715.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:42:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16813-RB | 902 | CG16813-RB | 234..785 | 10..561 | 2760 | 100 | Plus |
| CG16813-RA | 715 | CG16813-RA | 47..598 | 10..561 | 2760 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:41:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13227853..13228404 | 10..561 | 2760 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 23:42:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6883 | 281..441 | 164 | 61.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6900 | 251..434 | 154 | 57.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2314..2481 | 278..447 | 150 | 59.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6746..6823 | 364..441 | 128 | 65.8 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1052..1146 | 343..440 | 121 | 63.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6725..6802 | 364..441 | 119 | 64.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6767..6847 | 364..441 | 118 | 64.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6719..6799 | 361..441 | 116 | 63.4 | Plus |
FMO13715.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:45:47 Download gff for
FMO13715.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16813-RA | 41..603 | 1..566 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:21:50 Download gff for
FMO13715.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16813-RA | 41..603 | 1..566 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:21:50 Download gff for
FMO13715.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13227847..13228409 | 1..566 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:45:47 Download gff for
FMO13715.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13227847..13228409 | 1..566 | 98 | | Plus |
