FMO13717.5prime Sequence
912 bp (912 high quality bases) assembled on 2013-08-24
> FMO13717.5prime
TCAGTCGACATGGATGGTCGTGGAACATTCCTAGTTCTTCTGATTTTTGG
TTTTTTCAGGAACTCACAGGAAAAATTTGTTTGGTGTACGGGTGGAGCAT
CTTCGCTTTTTGTGGCCATCGCTTTGCCTTTGGACTTACGGTTTGAAAAA
GCCTTTTTGTCCTATAATTTTGAAGTGTCCTACGATTTACCAAGATCGTG
GAAACAGAAACCACCGTTTTTGCGACATGGAAATGGCACGAATGATGAAA
GTTTACTGAGTGATCACCATGGCCATCATCAGAATGATGATTTCGTTTAC
GATGACTATTACGATGATGATCAAAACTCTGGTAATAAGCACAAACACAA
ACACCATCCACATCATCATGATAAGAAAAAGAAGAAGAGTAAGCCTAAGC
CCGGTTCTGTTATCAAGCCACAGAAAAATAAGCCCAAGCATAAGCATAAG
AAAAAGCACAAGTCAAAGCCAAAGCCACCGCCAGAAGTGGATGAGGATGA
CTACAAGGACTTCTTTCAGGGATTTCCCTTGGATGGCATGGGTGAATCTG
TGGGCAGAGATCGCCAGAGTAGGTCACTACTCTCACGCACTAAGTTCTAT
TATATAATCAACCATCGGTTCGAATTGCATGGATTAGGCGCAGGCGACAG
CTGTTTATTAAGACTGATTTGTGAGGCAAATAGCTACCAATTGGGAGATC
TCAATGGTGTGCTAGGCAGCTTAATACATGTAATGTTCAGTCCCAGCAGC
TCTCGGTATGAGGAATTACCTAAGCGTTACTACATCGCAGAATTTGGATG
GTCGGAATGGCACTGCGGAGGCTATCGAGTGCAATGTGAGCATAGTGTTC
TCGACATGATCACGCAACCTGTGAAAAATAAAAACAAAATGCACGCAAGC
TTTCTAGACCAT
FMO13717.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:42:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34444-RA | 920 | CG34444-RA | 26..910 | 10..894 | 4380 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:42:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14369584..14369989 | 222..627 | 2030 | 100 | Plus |
| 2R | 25286936 | 2R | 14370049..14370316 | 627..894 | 1245 | 99.3 | Plus |
| 2R | 25286936 | 2R | 14369403..14369520 | 105..222 | 590 | 100 | Plus |
| 2R | 25286936 | 2R | 14369242..14369337 | 10..105 | 480 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:42:16 has no hits.
FMO13717.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:45:51 Download gff for
FMO13717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34444-RA | 26..915 | 10..900 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:21:53 Download gff for
FMO13717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34444-RA | 26..915 | 10..900 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:21:53 Download gff for
FMO13717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14369242..14369337 | 10..105 | 100 | -> | Plus |
| 2R | 14369404..14369520 | 106..222 | 100 | -> | Plus |
| 2R | 14369585..14369988 | 223..626 | 100 | -> | Plus |
| 2R | 14370049..14370321 | 627..900 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:45:51 Download gff for
FMO13717.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10256747..10256842 | 10..105 | 100 | -> | Plus |
| arm_2R | 10256909..10257025 | 106..222 | 100 | -> | Plus |
| arm_2R | 10257090..10257493 | 223..626 | 100 | -> | Plus |
| arm_2R | 10257554..10257826 | 627..900 | 98 | | Plus |
