FMO13719.5prime Sequence
924 bp (782 high quality bases) assembled on 2013-08-24
> FMO13719.5prime
TCAGCTCGACATGTCAAACCTCCAGTTAACTCAGGAAAAACTAGATGCCC
TACGCTCCGAATACAGGCCACGCCGGCCGTGCGCCCTGCTGAAATATCCT
CGACCCAAGACAAAGCCGGAGTACCAGGCGATATATCCGTGGTTGCTCCC
GGATGAGACGGATCCGCACTTCGTGTTCTGCGCGGTGTGCGAGTGCAGGC
TCAGCTGCAAGAGATCTGATCTGGGAAAGCACGAGGGTAGCATTAAGCAC
TCGGAAAATGCACAAAGAAAATCATTGCCAGCCAAGGCAAACAATTCGAG
CTTCAATGGATCCAGCTCCGGTGCGATGAAGTGGGAGGATACCGAGGACG
AGGAGGGTCTACTACAATACGGAACAGATCCCCAAGACGACGAGACAGAA
GATGAGGAGGAGGGAGAACTTGACGAAACAGAGGGCGACTGCGAGGACGA
TGAGAAGCGGACTCAAGAACTGGAAGCACAAAATGATCTCGAAACGGAGC
CCGTCATTAAGCAGCAGCGCCGCACTTCGGAGACCGACTCACAGAATTCT
GGCATGCTGGATTATCTGCCACTACACGTGACCATCAACGAGGGGCCTCA
AAGTCTTCCGACCACTGTCTCCGCCTATCCCACATCCTCAGCAACAGCAA
CAGTAGCTCCGCCATGCAGGATCACCATTAAAAAAGTTCCAGGTGCACAG
TACTCCACCTCAGTGGGATGGTGCCAAGCTCAGGAGATCAATTCCAGGCC
ACCATAACGGCCTATACACACGGACGGCCCTCCTATGCTGCCCGCCCCGC
TGCAATCTTATCAACTGCAACCATTGTCACCCTATAACGCCCACCGCGCG
CGACTCAATGGGAGCTGTCTCGGACAGGCATATTGGGCCCACGTCAAGGA
ACTTTGCCGGCCAACCTGGGCACC
FMO13719.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:42:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Ravus-RA | 1269 | CG15889-RA | 64..963 | 11..924 | 4005 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:42:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 13263124..13263906 | 831..43 | 3555 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:42:21 has no hits.
FMO13719.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:45:53 Download gff for
FMO13719.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ravus-RA | 64..920 | 11..877 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:21:54 Download gff for
FMO13719.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Ravus-RA | 64..920 | 11..877 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:21:54 Download gff for
FMO13719.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 13263124..13263906 | 43..831 | 98 | <- | Minus |
3R | 13263967..13263998 | 11..42 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:45:53 Download gff for
FMO13719.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 9088846..9089628 | 43..831 | 98 | <- | Minus |
arm_3R | 9089689..9089720 | 11..42 | 100 | | Minus |