FMO13721.5prime Sequence
429 bp (429 high quality bases) assembled on 2013-08-24
> FMO13721.5prime
TCAGTCGACATGAGTAACACTCGAACAGTACACAGCAGCACATCAATATC
AAAGATGAATTCCGCACTGCAAATCAGCTGCCTTCTCGTTGTTCTTGGCT
GCCTTTTGGGTTCAGGACACTGCCAAAGTGAAGCTGAATTCGCGGCCAAG
TCCCGAGAAATAGCCCAAGTATTCGGCAATCCCTCCGTCGATAAATACAC
GAAGGCTCGCAATTTGCCCACGCTGATTGCCTTCTACGAGAAATACTCCA
GTCGCCTACGATTGACACCTCAGGAAAGGATTAGTATCAATAATGCTATG
AGGCAATATAAGGCACAACGAAACCAGCAAGTTGACGGAGTATCTGCCCA
GGGAGGATGGTTGTCTGACATTATCAAGACAGCAATTTCGATCATTGTAA
AGGCCGTTGAAGCAAGCTTTCTAGACCAT
FMO13721.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:42:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Victoria-RA | 522 | CG33117-RA | 1..402 | 10..411 | 2010 | 100 | Plus |
| TotF-RA | 506 | CG31691-RA | 115..242 | 127..254 | 190 | 77.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:42:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19913058..19913393 | 411..76 | 1680 | 100 | Minus |
| 2L | 23513712 | 2L | 19913449..19913516 | 77..10 | 340 | 100 | Minus |
| 2L | 23513712 | 2L | 19912079..19912206 | 254..127 | 190 | 76.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:42:28 has no hits.
FMO13721.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:45:56 Download gff for
FMO13721.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Victoria-RA | 1..402 | 10..411 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:21:57 Download gff for
FMO13721.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Victoria-RA | 1..402 | 10..411 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:21:57 Download gff for
FMO13721.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19913058..19913391 | 78..411 | 100 | <- | Minus |
| 2L | 19913449..19913516 | 10..77 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:45:56 Download gff for
FMO13721.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19913058..19913391 | 78..411 | 100 | <- | Minus |
| arm_2L | 19913449..19913516 | 10..77 | 100 | | Minus |
