Clone FMO13722 Report

Search the DGRC for FMO13722

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:137
Well:22
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG34189-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO13722.5prime Sequence

396 bp (396 high quality bases) assembled on 2013-08-24

> FMO13722.5prime
TCAGTCGACATGATGGTTTGGTTCAATTCCCTCTGCTTTCTGCTGCTGCC
GGCCTTGCTGATGGATTCGGTCATGACAACTGGCATCGACGAGGATCATA
TCCTGAACCATGATGTGGACCCGGATCCGGGCCGCATGAAGTACATATGG
AATCCGTTTTCGGGATTTTGCGGCGAGAATGCCACCATGGTGAGGTGTGC
TGGAGTTTGCCCCGAAACCTGTGCCTTCAAATCGCTCAAGTGTCCCAAAT
ATTGCGGTGTAAATTGCGTATGCAAACCTGACTATGTCTTTAACGAAAAT
CTGCAACTATGCATCCTTAAAACTGATTGTCCTCTAGACATAAAGCAACT
GGTTGTTGAAACTCATCGCGTTTTTCAGGCAAGCTTTCTAGACCAT

FMO13722.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:41:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG34189-RA 482 CG34189-RA 60..429 9..378 1850 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:41:39
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 16754503..16754872 9..378 1850 100 Plus
Blast to na_te.dros performed on 2014-11-28 23:41:40 has no hits.

FMO13722.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:45:41 Download gff for FMO13722.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34189-RA 60..432 9..382 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:21:45 Download gff for FMO13722.5prime
Subject Subject Range Query Range Percent Splice Strand
CG34189-RA 60..432 9..382 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:21:45 Download gff for FMO13722.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 16754503..16754875 9..382 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:45:41 Download gff for FMO13722.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12642008..12642380 9..382 99   Plus