FMO13723.5prime Sequence
573 bp (573 high quality bases) assembled on 2013-08-24
> FMO13723.5prime
TCAGTCGACATGCCGAATCGCGCGACGCGGAAGAAATATCGCCGGATTCG
ACTCCACATTTTCCTGGCATTATCCCTATGGTTCCTGATCGAGGCTCATC
CCGTCGAAGGAACACGGTGCAGGAATCCCTATGAGAGGGTACGGGAAAAC
TATTGCTACTTCGTTGCTGACGAGGAACCGCTGCACACATCGTTCCATAA
CTTTTGCTATCAGGACAAGCGCACCTCACGAGTTTGCCTGGATAGTGACG
AGGAAATGCGCGTTCTGGCCCATCACCTGGCCAACTTGGGCTACCCGAAC
GGCACGCAGTTCTGGAGCGCCGGGCATCGATGGCCGGGTGATAACCGCTT
CTACTGGAACTACTTTGGCAGAGCCCGACCGCTCAACTACTCCAACTGGG
CGGTGGACGAGCCGACGCCCCAAATGGGCCGCAATTGCCTGATCCTCACT
CTCCAGGGTGGAGAACTCATCATGAGCAGTGAGTCCTGCTACACCCGAGC
GGTCGATATCTGCGAACAGACGCTGAACGGCACGGATTCCCGTCCCGTAA
TCCACGCAAGCTTTCTAGACCAT
FMO13723.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:41:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13086-RB | 690 | CG13086-RB | 20..565 | 10..555 | 2730 | 100 | Plus |
| CG13086-RA | 617 | CG13086-RA | 20..565 | 10..555 | 2730 | 100 | Plus |
| CG13086-RC | 572 | CG13086-RC | 148..520 | 183..555 | 1865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:41:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19364973..19365345 | 183..555 | 1865 | 100 | Plus |
| 2L | 23513712 | 2L | 19364394..19364567 | 10..183 | 870 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:41:46 has no hits.
FMO13723.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:45:43 Download gff for
FMO13723.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13086-RA | 12..565 | 1..555 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:21:47 Download gff for
FMO13723.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13086-RA | 12..565 | 1..555 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:21:47 Download gff for
FMO13723.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19364386..19364567 | 1..183 | 97 | -> | Plus |
| 2L | 19364974..19365345 | 184..555 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:45:43 Download gff for
FMO13723.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19364386..19364567 | 1..183 | 97 | -> | Plus |
| arm_2L | 19364974..19365345 | 184..555 | 100 | | Plus |
