Clone FMO13724 Report

Search the DGRC for FMO13724

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:137
Well:24
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG9269-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO13724.5prime Sequence

465 bp (465 high quality bases) assembled on 2013-08-24

> FMO13724.5prime
TCAGTCGACATGCGTAGCTGGTTTTTATTTGGATTATATGCGCTGCTAAT
CGCCGCAACAGTTGGCCAACCGCTGCAGCAAAATGAGTCCGGAAAAAACG
AGGATAGCGAAAGGAGCGAGCGAGTGAGTCGCCAAATTCCCTATTTGGGT
GGCTACGGAGGATATGGTAGTGGCTACGGCGGATTTGGAGGAGGCTATGG
AGGCTACGGAGGCTATGGCGGCTATGGCGGACTCGGCGGTTATGGGGGAT
ACGGGGGCTATGGAAGCTACGCCGGCATACGCTCCTCACTTTATCCCTAC
GGCAATCTGTATGGCGGCAGCGGCTTGGGACTGGCGGGCGGATATTATGG
TCGTCCTTATGGTTATGGCGGTGGCTATAATATTGGATATCCGGCCATTG
GCGGCTTCGGTGCCACCGGCGGCGGCATCTTTGGTGTTAGTCCATTCGCA
AGCTTTCTAGACCAT

FMO13724.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:41:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG9269-RA 576 CG9269-RA 88..525 10..447 2190 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:41:51
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13616004..13616441 10..447 2190 100 Plus
Blast to na_te.dros performed on 2014-11-28 23:41:52 has no hits.

FMO13724.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:45:44 Download gff for FMO13724.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9269-RA 88..534 10..457 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:21:48 Download gff for FMO13724.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9269-RA 88..534 10..457 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:21:48 Download gff for FMO13724.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 13616004..13616450 10..457 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:45:44 Download gff for FMO13724.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9441726..9442172 10..457 99   Plus