FMO13725.5prime Sequence
546 bp (546 high quality bases) assembled on 2013-08-24
> FMO13725.5prime
TCAGTCGACATGCTGCGCCACCTGCTCCGCCACGAGAACAACAAGGTCTT
CGTCCTGATCCTGCTCTACTGCGTCCTGGTCAGCATTCTGAAACTCTGCA
CGGCACAGCCGGATAGCTCTGTGGCCGCCACGGATAATGATATTACGCAT
CTTGGCGACGATTGTCAGGTGACGCCCGTCATCCATGTGCTCCAGTATCC
TGGATGTGTGCCCAAGCCGATTCCCTCGTTCGCCTGCGTGGGTCGCTGTG
CCAGTTATATCCAGGTTTCGGGCAGTAAGATCTGGCAAATGGAGCGTTCC
TGCATGTGCTGCCAGGAGTCTGGTGAGCGGGAGGCAGCCGTCTCGCTATT
CTGTCCCAAAGTGAAGCCCGGCGAGCGTAAATTCAAGAAGGTCCTGACCA
AGGCGCCATTGGAGTGCATGTGTCGGCCATGCACTTCCATTGAGGAGTCT
GGCATCATACCACAGGAAATTGCCGGCTATTCGGACGAGGGTCCACTCAA
CAATCACTTCCGGCGCATTGCTCTGCAAGCAAGCTTTCTAGACCAT
FMO13725.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:42:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Burs-RA | 640 | CG13419-RA | 30..552 | 6..528 | 2600 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:42:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21769926..21770191 | 263..528 | 1330 | 100 | Plus |
| 3R | 32079331 | 3R | 21769547..21769685 | 6..144 | 665 | 98.6 | Plus |
| 3R | 32079331 | 3R | 21769744..21769871 | 139..266 | 640 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:42:38 has no hits.
FMO13725.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:46:03 Download gff for
FMO13725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| burs-RA | 25..558 | 1..536 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:22:02 Download gff for
FMO13725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Burs-RA | 25..558 | 1..536 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:22:02 Download gff for
FMO13725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21769928..21770197 | 265..536 | 98 | | Plus |
| 3R | 21769745..21769869 | 140..264 | 100 | -> | Plus |
| 3R | 21769542..21769680 | 1..139 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:46:03 Download gff for
FMO13725.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17595264..17595402 | 1..139 | 97 | -> | Plus |
| arm_3R | 17595467..17595591 | 140..264 | 100 | -> | Plus |
| arm_3R | 17595650..17595919 | 265..536 | 98 | | Plus |
