FMO13726.5prime Sequence
348 bp (348 high quality bases) assembled on 2013-08-24
> FMO13726.5prime
TCAGTCGACATGAACTATCAACATTACAGGGCCACAACGCTGGGCAGAAC
GCTCCAGGACACTTTGGATGAGATGATGGAGAGGGGCGATATAACCAAGA
AGATTGCTAATTTGGTTTTACTAAGATATGACAAGAGCATTTCAACAGCT
CTCAAGGATCATGGCACGAGCAATATGTCCTTTACGGCCGAAAGACTGGA
AACCTTTAGATGCTGCGACAATGTGTGGACTCTGATCCTAAAGGACGCGG
AGTTCCGCGAGGATCAGCATTCCTTGAAGGTCGATGTGGTCAAAATTGTG
GCCTGTCTTGGAACTGACAATGGAAATGAAGCAAGCTTTCTAGACCAT
FMO13726.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:42:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TfIIA-S-2-RA | 462 | CG11639-RA | 90..419 | 1..330 | 1620 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:42:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1011144..1011401 | 330..73 | 1260 | 99.2 | Minus |
| X | 23542271 | X | 1011474..1011554 | 81..1 | 375 | 97.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:42:42 has no hits.
FMO13726.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:46:05 Download gff for
FMO13726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TfIIA-S-2-RA | 90..422 | 1..334 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:22:03 Download gff for
FMO13726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TfIIA-S-2-RA | 90..422 | 1..334 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:22:03 Download gff for
FMO13726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1011141..1011392 | 82..334 | 99 | <- | Minus |
| X | 1011474..1011554 | 1..81 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:46:05 Download gff for
FMO13726.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 905174..905425 | 82..334 | 99 | <- | Minus |
| arm_X | 905507..905587 | 1..81 | 97 | | Minus |
