FMO13730.5prime Sequence
405 bp (405 high quality bases) assembled on 2013-08-24
> FMO13730.5prime
TCAGTCGACATGAACCAGTTAACCTTTGTATGCTGCCTTTTGTTGTGGTC
CGGGTCTCAGGCTGCGTTCCAGGACTTTGTGATTGGACCTGAATCCTATG
AAGGTGGTAACGATGTCGTCCCGTTTGGTCAAGAATTATCGGATGAGGTG
GATGAGGATATAATGGTGTCATTCCAGGATGTACAGCATGATGGAATAGT
GGATACCAATCTACTGATGAAAGCTATAATGCAGCATGCCAAACGTTTGG
GCATGAGCCTGGATGAACTTGCTAGCTTAAATGTGCAGTCAGAAGATGAG
GAATCTATGAACCAACTTGGGTGCTCAGCTGAGCAAGACGTCTTCGGATA
CCCAGAAAAGCCCACTTGGCGGGACGTACTCTTTAACGCAAGCTTTCTAG
ACCAT
FMO13730.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:42:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34185-RA | 450 | CG34185-RA | 63..440 | 10..387 | 1890 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:42:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14374014..14374191 | 271..94 | 890 | 100 | Minus |
| 2R | 25286936 | 2R | 14373839..14373955 | 387..271 | 585 | 100 | Minus |
| 2R | 25286936 | 2R | 14374250..14374333 | 93..10 | 420 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:42:53 has no hits.
FMO13730.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:46:12 Download gff for
FMO13730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34185-RA | 63..445 | 10..393 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:22:10 Download gff for
FMO13730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34185-RA | 63..445 | 10..393 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:22:10 Download gff for
FMO13730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14373834..14373954 | 272..393 | 97 | <- | Minus |
| 2R | 14374014..14374191 | 94..271 | 100 | <- | Minus |
| 2R | 14374250..14374333 | 10..93 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:46:12 Download gff for
FMO13730.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10261339..10261459 | 272..393 | 97 | <- | Minus |
| arm_2R | 10261519..10261696 | 94..271 | 100 | <- | Minus |
| arm_2R | 10261755..10261838 | 10..93 | 100 | | Minus |
