FMO13731.5prime Sequence
450 bp (450 high quality bases) assembled on 2013-08-24
> FMO13731.5prime
TCAGTCGACATGCATGTCCAGGAACTGCTCTTTGTGGCCGCGATCCTAGT
GCCCCAATGCCTGAGGGCATTGCGATATAGCCAAGGCACTGGCGACGAGA
ACTGCGAGACTCTCAAGTCGGAGATCCACTTGATCAAGGAGGAGTTCGAC
GAGCTGGGCCGGATGCAGAGGACCTGCAATGCCGACGTCATCGTCAACAA
ATGCGAAGGATTGTGCAACAGTCAGGTGCAACCATCGGTGATAACGCCCA
CGGGGTTTCTGAAAGAGTGCTACTGCTGCCGCGAAAGCTTCCTCAAGGAA
AAGGTCATCACTCTAACCCATTGCTATGACCCGGACGGCACCCGTTTGAC
CTCTCCGGAAATGGGAAGCATGGATATACGTCTTCGGGAGCCCACCGAGT
GCAAGTGCTTCAAATGTGGCGATTTCACACGTGCAAGCTTTCTAGACCAT
FMO13731.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:42:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pburs-RA | 545 | CG15284-RA | 13..436 | 9..432 | 2120 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:42:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14417063..14417319 | 265..9 | 1285 | 100 | Minus |
| 2L | 23513712 | 2L | 14416838..14417005 | 432..265 | 840 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:42:56 has no hits.
FMO13731.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:46:14 Download gff for
FMO13731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pburs-RA | 5..439 | 1..436 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:22:11 Download gff for
FMO13731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pburs-RA | 5..439 | 1..436 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:22:11 Download gff for
FMO13731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14416835..14417005 | 265..436 | 98 | <- | Minus |
| 2L | 14417064..14417323 | 1..264 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:46:14 Download gff for
FMO13731.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14416835..14417005 | 265..436 | 98 | <- | Minus |
| arm_2L | 14417064..14417323 | 1..264 | 98 | | Minus |
