FMO13735.5prime Sequence
953 bp (832 high quality bases) assembled on 2013-08-24
> FMO13735.5prime
TCAGTCGACATGACGACCTACTTCAACTACCCCAGCAAGGAGCTGCAGGA
TGAGCTGCGCGAAATCGCCCAGAAAATCGTTGCCCCCGGCAAGGGAATCC
TCGCCGCCGATGAGTCCGGCCCAACCATGGGCAAGCGTCTGCAGGACATC
GGCGTGGAGAACACCGAGGACAACCGCCGTGCCTACCGTCAGCTGTTGTT
CAGCACTGACCCCAAGCTGGCCGAGAACATCTCTGGAGTGATCCTGTTCC
ACGAGACCCTCTACCAGAAGGCCGATGATGGCACCCCCTTCGCCGAGATC
CTGAAGAAGAAGGGAATCATTCTGGGCATCAAGGTCGACAAGGGTGTTGT
CCCACTGTTCGGCTCTGAGGATGAGGTCACCACCCAGGGTCTGGATGACC
TGGCCGCCCGTTGCGCCCAGTACAAGAAGGACGGTTGCGACTTCGCCAAG
TGGCGTTGCGTCCTGAAGATCGGCAAGAACACCCCATCCTACCAGTCGAT
CCTGGAGAACGCCAATGTCCTGGCCCGCTACGCCTCCATCTGCCAGTCGC
AGCGCATCGTCCCAATTGTGGAGCCCGAGGTTCTGCCCGATGGCGATCAC
GATCTGGACCGCGCCCAGAAAGTCACCGAGACCGTCCTGGCCCGCCGTCT
ACAAGGCCCTGAGCGACCACCACGTCTACCTGGAGGGTACTCTGCTGAAG
CCCAACATGGTCACCGCCGGTCAGTCGGCCAAGAAGAACACCCCCGAGGA
GATCGCCCTGACCACCGTGCAGCTCTGCGCCGCACGTTCCCGCGCGTTAC
TGACGTGACCTTCTGTCTGAGTCAGTCCGAGAGAGCACGTCACCTGATGC
ATCACACGTTCCTGATCGCCCATGGACCTCACTTCTCGTACGTCGTGCCC
TGCAGCTCGTCTGCCGGCTGGCCTGGCAGATGAGACATGCTGCCCGGCGA
ACG
FMO13735.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:42:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ald-RM | 2102 | CG6058-RM | 278..1195 | 10..905 | 3955 | 97 | Plus |
| Ald-RJ | 1614 | CG6058-RJ | 277..1194 | 10..905 | 3955 | 97 | Plus |
| Ald-RL | 1615 | CG6058-RL | 278..1195 | 10..905 | 3955 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:42:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26257245..26258020 | 785..10 | 3755 | 99.5 | Minus |
| 3R | 32079331 | 3R | 26414213..26414676 | 91..554 | 445 | 73.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:42:35 has no hits.
FMO13735.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:46:01 Download gff for
FMO13735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ald-RL | 278..1108 | 10..835 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:22:00 Download gff for
FMO13735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ald-RL | 278..1108 | 10..835 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:22:00 Download gff for
FMO13735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26257245..26258020 | 10..785 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:46:01 Download gff for
FMO13735.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 22082967..22083742 | 10..785 | 99 | | Minus |
