FMO13739.5prime Sequence
402 bp (402 high quality bases) assembled on 2013-08-24
> FMO13739.5prime
TCAGTCGACATGAAGACAGTCATTCTATTTGGCTTCCTGCTGGCACTTCT
TGGATATTTGGAAGCAGAACATGCACAGAGTGATCCTGAATTCACGGCCA
AGGCACGTCAAATGCTCGCAGTCTTCGGCAACTCAGAGGTCGATAGATAC
ACCAAGTCCCGAAATTTGCCCGCATTGATTGAGTTCTACGAGAAGTACTC
CAGTCGTCTGCCACTGACTGTCCAGGATCGGACCTATGCCAACAATGTGA
TCAGGAGGTACCGGGCACACAACAACCAACAGGTCGATGGTGTTCCTGCT
CAGGGCGGAGTTGGTGTGGTGTTCGCGCTACTTCTTCCTTTCGCTGTGTC
AATTGTGGAAGGAATCGCCAAGGCGATCAGAGAAGCAAGCTTTCTAGACC
AT
FMO13739.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:43:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TotF-RA | 506 | CG31691-RA | 46..420 | 10..384 | 1875 | 100 | Plus |
| Victoria-RA | 522 | CG33117-RA | 118..245 | 79..206 | 190 | 77.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:43:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19911901..19912253 | 384..32 | 1765 | 100 | Minus |
| 2L | 23513712 | 2L | 19913215..19913342 | 206..79 | 190 | 76.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:43:22 has no hits.
FMO13739.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:46:32 Download gff for
FMO13739.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TotF-RA | 37..424 | 3..390 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:22:26 Download gff for
FMO13739.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TotF-RA | 37..424 | 3..390 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:22:26 Download gff for
FMO13739.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19911897..19912252 | 33..390 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:46:32 Download gff for
FMO13739.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19911897..19912252 | 33..390 | 99 | <- | Minus |
