FMO13740.5prime Sequence
756 bp (756 high quality bases) assembled on 2013-08-24
> FMO13740.5prime
TCAGTCGACATGCCATCGCCCAAGAAAAGAAGTGTGGATAAAGCGGATGG
CAAGAAGGGCAAGGGTCAAGGAGCAGGCGGCGTGAAGGGATGCTGCTGCA
AGCGGTCGCAGTGCATCAAGAACTACTGCGACTGCTATCAGTCCATGGCC
ATCTGCACCAAGTTCTGTCGATGCGTTGGCTGCAGGAACACAGAGGTGCG
CGAGTTGGTGGACCCCAACTCCGTGGCCAAGAATTCCAGCGCTGTGAAAA
GGCAGAAGGCGGCTGCGATGAGCGCCAAGGCAGCAGCCGCAGCTGCCAAG
GCGGGCATCGATGTCCAGGGCAAGGCGCTCCAGGTGGCGGCATCCACTTT
GGCGTTGCCCGGCAAGGCGCTAATGACGCCGCCAAAGTATACCCTAGTGG
CTGGCAAACCACCGATGGCTAGTAGTCACATTAACCCCATACCCATCTCA
CGACCCATAGCGACTGCCGCCACTCCAGCCAGGGCGGTGAAGCAACCGGC
GGAACCTCCGATGCCCGTCAATCTGATCATTCCGGTGCGGCACGACGATC
GCAGGGATCGGAATCTCTTCGTGCAGCCGGTGAACGCGGCTCTGCTGGAG
TGCATGCTCATCCAGGCCACGGAAGCCGAACAGTTGGGCCTGAACGAGCT
CCAAGTGTGCCAGCTGGTGCTCGAAGAGTTTATGCGCGGCTACAAGAACA
TTTTGGAGAAAATATGCGAGTACAGCAAGGATTATTATGCAAGCTTTCTA
GACCAT
FMO13740.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:43:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tomb-RA | 836 | CG14016-RA | 31..761 | 8..738 | 3640 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:43:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5535936..5536496 | 738..178 | 2790 | 99.8 | Minus |
| 2L | 23513712 | 2L | 5536557..5536728 | 179..8 | 860 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:43:26 has no hits.
FMO13740.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:46:34 Download gff for
FMO13740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tomb-RA | 25..766 | 1..745 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:22:27 Download gff for
FMO13740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tomb-RA | 25..766 | 1..745 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:22:27 Download gff for
FMO13740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5536558..5536733 | 1..178 | 98 | | Minus |
| 2L | 5535931..5536495 | 179..745 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:46:34 Download gff for
FMO13740.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5535931..5536495 | 179..745 | 99 | <- | Minus |
| arm_2L | 5536558..5536733 | 1..178 | 98 | | Minus |
