FMO13743.5prime Sequence
618 bp (618 high quality bases) assembled on 2013-08-24
> FMO13743.5prime
TCAGTCGACATGTCGTCGCGTACGAGCGGATATAGTAGTGGAGTTCGCTC
TCAACGTTATCCTGGTGGGCAGTACCAGGGCAAATGGTTGGGCCAGCAGC
CTCACGGGTTTGGGGTAAAGCAAACGAGCAGTGGACTTGTCTACGAGGGT
CACTGGCAGAAGGGTCAACGGCATGGCATCGGAAGTTTGCGTCGCAAGGA
GCTCGATGGCCGCATGGAACGCATCTACGTGGGTCAGTGGCGGGAGAACA
AGCGGAGTGGCGAGGGCAAGCAGTTCTATCCGGACGGATCCGTCTACTTT
GGTCAGTGGCTAGCGGACCAGCGAAGTGGAGAGGGCATCCTATGGCAGGC
GGATGGCGGCATCTATGTGGGCGAGTGGCTTCGGGACAAGATGCACGAAA
AGGGTTTACTTTTCACGGCAACGGGAAATCGCTACGTGGGTCAATTTGAA
GGAGGCTGCAAATCGGGCTCAGGTGTATTTTACCATGCCAGCAATGGACA
GCGGATTCAGCACGGTTTTTGGAGCAAGGACATCTGTAGAACGTCACTAC
TGTCCCTGCCACAAGATAAAAACAATGAATTTATGTCAAAAGCTCTTTTG
GCAAGCTTTCTAGACCAT
FMO13743.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:43:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14490-RA | 711 | CG14490-RA | 37..630 | 7..600 | 2970 | 100 | Plus |
| thr-RC | 4578 | CG5785-RC | 4341..4523 | 600..418 | 915 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:43:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17860796..17861207 | 7..418 | 2060 | 100 | Plus |
| 2R | 25286936 | 2R | 17861328..17861510 | 418..600 | 915 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:43:36 has no hits.
FMO13743.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:46:39 Download gff for
FMO13743.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14490-RA | 32..633 | 1..604 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:22:33 Download gff for
FMO13743.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14490-RA | 32..633 | 1..604 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:22:33 Download gff for
FMO13743.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17860791..17861207 | 1..418 | 99 | -> | Plus |
| 2R | 17861329..17861513 | 419..604 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:46:39 Download gff for
FMO13743.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13748296..13748712 | 1..418 | 99 | -> | Plus |
| arm_2R | 13748834..13749018 | 419..604 | 98 | | Plus |
