FMO13744.5prime Sequence
735 bp (735 high quality bases) assembled on 2013-08-24
> FMO13744.5prime
TCAGTCGACATGTGCTCTGGCCAGAATGTAACGAAATCAAACAATAGCCA
GGACATCATCACAGTGAAGGTCTTGCCGCAGTCAATATCTTCAGATCCTT
CAACTGGTTCTTCCAGCTCAACCACCGCCACACCCACAGCCACAACTCCC
AAACTAAAATCCAATCCTACAGCCAAGTCCGCCATACAGGCTCACGAAAT
CGAGGAGGAGGACGACGACTTCCACAACGATCGTCTTCCCGCCTTATCAG
AGGATGAGTACAACAACCTGAGTGAGGACGCCAATCCGCTGCACTTCCTT
AAGCAACAGCCCCTGGATCTTGAAAATGTGGAGCCGCAGCAGAAGCCTGA
ATCTCAAACCGAGAGTAAGCCAGATCCGCAAGTGATGGCTCCACAAACCG
CCGGCTCACCCATCTACATAACCATTCCCATTTACATAAGCACGGGCGGT
AAGCTGCCCATTAGTTTGACCATTGGAGATCAGGATTTGTCATTGAAAAA
GGAAAGCGGATCTGGATCCAGCAAGAAGAATCACTCTACCAAATCACCGA
ACTCGTTCTTCAATCGCTTGCTGCAGCAGATTGAGTCTCCCAAGAGACGA
ACCACCAATCGCCATCGCAGCCAACTCAAGAGTCACGTATATGCGATGAA
GGAGATGGACAACCAGGGGAACAAGGATGGCAAGAAACTCAAGATTTTGC
TTCATAGCCCAATGCAAGCAAGCTTTCTAGACCAT
FMO13744.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:43:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14111-RB | 792 | CG14111-RB | 82..789 | 10..717 | 3540 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:43:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13379992..13380377 | 332..717 | 1930 | 100 | Plus |
| 3L | 28110227 | 3L | 13379292..13379615 | 10..333 | 1620 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:43:40 has no hits.
FMO13744.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:46:42 Download gff for
FMO13744.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14111-RB | 52..762 | 10..721 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:22:35 Download gff for
FMO13744.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14111-RB | 82..792 | 10..721 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:22:35 Download gff for
FMO13744.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13379292..13379615 | 10..333 | 100 | -> | Plus |
| 3L | 13379994..13380380 | 334..721 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:46:42 Download gff for
FMO13744.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13372392..13372715 | 10..333 | 100 | -> | Plus |
| arm_3L | 13373094..13373480 | 334..721 | 99 | | Plus |
