FMO13746.5prime Sequence
1072 bp (954 high quality bases) assembled on 2013-08-24
> FMO13746.5prime
TCAGTCGACATGTACGGCCAAGGATTACGTTTTCTTCTCGCCCAGCTTGT
TTTGGTGCTCCTTTTGTCCAATGCCTTGGGTCGCCTGCACAAGAGGAATG
GCTATCACTACCGACCGCAGCAACCGCCACCAATCCACCAAGGTGGTTAC
TTTGAGCCCCATCTGCCGGCAGTAGAGCCTCCCGAGCCAGAGAAGCCACA
ACATAGCACCAAAAGCTACTACACCACATCGGGAGGTAGCTCCTCAGTTT
CCAGCAAGGGATCCGGTGGCTATAGCATTGGCAGCGGCCTGCGTTCCATT
GCCCAGGGATCGGCGGATCAGGCTCACAGTGCAGTGACCAACCAGCATGC
AGCTGCCAAGCAGGCGGCCTATATAGCCCAGAATACACTGGCCCAAGCGG
CTTCTCAGGCGGCGGCCACTGCACAAGCGGCTCTGGTGGGCAAGCAGGTT
GTTCTCCAGGAGTTGGAGCAGCAGGCAGCCGAGGCCCAAAGATCTCTGTC
CCGTGAGCTAGAGCAACTGAAGGCGGCCAAGATCTCCGCGAGATTGGCAC
AGCAAACGGCACAAGCGGCGCATCATCACATATCCGTGCTCACAGCTGCG
GTAAATAATGCCAAATCCGTGGCCGAACAGGCTGAGCAAACCTCCACGGA
GGTGAACAATCAACTGGCCTCCCAATCCCAGATGGTGGGTCAGTCCAAGA
ACCGATTAGAGCAGGTTGAGGAGCAGTTGCACCAGGCGCGCGTAGACTAT
GCGGCCACCAAGGAGTCCGCCCTTAAAGCGGCCAATTCCGCAGCTGCGGC
TCAGTGAATGCATCCAAAGGCGGCCCAGCATGCCACGATCGGATTGCATG
AGAGCACGAATCCATCAGCCCACGGGCACGATGGTCATGAGTTGGGTGGC
GAGGAGGAGTCCTACGATGAGCACCTAAACACAGTGCGGGAGTGGGACAC
ACTGGCGAGGAGAGGAACTATCCGAACATATTCGAGCTCCTAATGCAAGC
TTTTCTGATCAATCGTTTGGACGCCGGGGGCCCAGGAAGTGGCCCTAACC
CAATGTCTTAATCATAATCGAT
FMO13746.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:43:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33257-RA | 993 | CG33257-RA | 1..986 | 10..990 | 4725 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:43:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16346669..16347613 | 51..990 | 4365 | 98.4 | Plus |
| 3L | 28110227 | 3L | 16346319..16346368 | 6..55 | 235 | 98 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:43:07 has no hits.
FMO13746.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:46:20 Download gff for
FMO13746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33257-RA | 1..993 | 10..995 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:22:17 Download gff for
FMO13746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33257-RA | 1..993 | 10..995 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:22:17 Download gff for
FMO13746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16346316..16346368 | 1..55 | 94 | -> | Plus |
| 3L | 16346674..16347613 | 56..990 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:46:20 Download gff for
FMO13746.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16339416..16339468 | 1..55 | 94 | -> | Plus |
| arm_3L | 16339774..16340713 | 56..990 | 98 | | Plus |
