FMO13747.5prime Sequence
1050 bp (912 high quality bases) assembled on 2013-08-24
> FMO13747.5prime
TCAGTCGACATGACTACTAAAACTGGAACTTATAGACCTTCGGCTAGCCT
TATTGTAGCCGCCAAAGAGGATTCTTTAGAGGACTACGACTACAGATTAT
TGTTGATTAAACGAACTGAAAAAACTTCCTATGCATTGAACCATTGCGTC
TTTCCTGGCGGCGTCTTCGATCCTATAGAAGATCAATCTGCGAAATGGAT
AACTTTTTTCAAATCCTTTGGGGTGACCGATGAACAATTAAAAATGTGTA
GGCACAATCAGGATTCTCCAAGGCCTGAGTTTCTATCCGGTGGAGACCAT
ATTTCAAGGGACATTGCACTGCGACTGACTGCGCTCAGGGAAACCTTTGA
AGAGGTGGGCATCTTGATTTGCACAGAACAGGACGACATACAAAAATGGG
ATTCTAAATCGGGTCATCCTAGAACCGTGCTTCTCGAGTCAAGCGAACAC
TTCGAATGGCAACATCGGGTTCACAATGATGCCTCACAGTTTCTGGAACT
CTTTCGGCATTATAAAGTCATTCCCAATATCTGGTCTCTTCAGGAATGGT
CCATTTGGAGGACAGCAGCCACTGCCAATCGGAAATATGACACTGTTTAT
TATATCACCATGTTAGATAAGTACACCAGGAATATAAAGCTGCTTCTGGA
ACCGCACGAGGTGGCTTCGGCCCACTGGTTGAGTCCGATCGAGGCTTGTC
GAGCTCACAGAAAGCCATTATTTGGCTCCCGTTCATGCTGCTCTATGACA
TCGCTCGTCTGATGAACTTCTATAGCTTTCAGGAGCTTCTCAACTTCTCC
CGCCAAAGAGCTGCAATGAAGCACATGTGCAGCCCGTCTACTATCGCTGC
GATGACTGCATGTTTGAGTTCTTCCTGTGATGAGCTCTATCCCAAGACCA
GGCGCTTGTACACAAACATTATCTGTCGGATCGGTGGACGACCTCATCGA
AAGTCCAGCAATACAATCCGCTATATCGTCTTACGACCTCCACCAGGTCG
TACTACCTCAATATACCGCCCCTGCAATGGGCATCTGCCACTGCAGCCTC
FMO13747.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:43:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18094-RB | 1357 | CG18094-RB | 225..1278 | 10..1050 | 4750 | 97.8 | Plus |
| CG18094-RA | 1196 | CG18094-RA | 64..1117 | 10..1050 | 4750 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:43:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19490634..19491600 | 97..1050 | 3885 | 97.2 | Plus |
| 2L | 23513712 | 2L | 19490486..19490576 | 10..100 | 440 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:43:10 has no hits.
FMO13747.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:46:23 Download gff for
FMO13747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18094-RA | 64..1117 | 10..1050 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:22:19 Download gff for
FMO13747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18094-RA | 64..1117 | 10..1050 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:22:19 Download gff for
FMO13747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19490486..19490572 | 10..96 | 100 | -> | Plus |
| 2L | 19490634..19491600 | 97..1050 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:46:23 Download gff for
FMO13747.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19490486..19490572 | 10..96 | 100 | -> | Plus |
| arm_2L | 19490634..19491600 | 97..1050 | 97 | | Plus |
