FMO13754.5prime Sequence
774 bp (774 high quality bases) assembled on 2013-08-24
> FMO13754.5prime
TCAGTCGACATGCAGTTACTGTGCTACTTCGTCATCCTTTTCGTTGGAAT
CGCACCGTGGTCATCCTTGGCCAACGATGATGGATGCAACGAAGTGGTCT
GCGGATCGGTGGTATCCAAGTGCCTCATCACCCAGAGCTGCCAGTGCAAG
TTAAATGACTGCCACTGCTGCAAGGACTGTCTAAATTGCCTTGGCGAACT
GTACATCGAGTGCTGTGGCTGCCTCGACATGTGTCCCAAGCACAAGGATG
TCCTGCCCTCGCTGACGCCGCGCTCGGAGATTGGAGACATTGAAGGAGTG
CCCGAGCTGTTCGACACCCTAACCGCCGAGGATGACGAGGGATGGTCCAC
CATAAGGTTCTCCATGCGAGCCGGCTTCAAGCAGCGCGTTCAGGGCGGCG
CGAGTGGTGATGCCGGAAACGGAAATGGAAATGGAAATGCCGGGTCTGCA
GGTGTCACCCTATGCACCGTGATCTATGTGAACTCGTGCATTCGGGCAAA
CAAGTGCCGGCAGCAGTGCGAGAGCATGGGAGCCAGTAGCTATCGATGGT
TCCACGACGGATGCTGCGAGTGCGTCGGCGAGAATTGCCTCAATTATGGA
ATCAACGAGAGTCGCTGCCGCGGTTGTCCGGAGGATCAGGACCAACTGCT
TACCGCCGATACCGTTCCGGCGGAGGCTGAACAGGATCTGGAGCGATTCT
TTGGCAACGAGGAGATCGAGGACGAGTGGGGCTATGGCGAGGAGGATGAA
TTTTCCGCAAGCTTTCTAGACCAT
FMO13754.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:44:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tsg-RA | 887 | CG1502-RA | 37..783 | 10..756 | 3735 | 100 | Plus |
| cv-RC | 1742 | CG12410-RC | 846..956 | 85..195 | 210 | 79.3 | Plus |
| cv-RB | 1308 | CG12410-RB | 412..522 | 85..195 | 210 | 79.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:44:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11988166..11988912 | 756..10 | 3735 | 100 | Minus |
| X | 23542271 | X | 5690847..5690957 | 85..195 | 210 | 79.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:44:01 has no hits.
FMO13754.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:46:54 Download gff for
FMO13754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tsg-RA | 28..786 | 1..760 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:22:48 Download gff for
FMO13754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tsg-RA | 28..786 | 1..760 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:22:48 Download gff for
FMO13754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11988163..11988921 | 1..760 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:46:54 Download gff for
FMO13754.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11882196..11882954 | 1..760 | 99 | | Minus |
