FMO13757.5prime Sequence
979 bp (979 high quality bases) assembled on 2013-08-24
> FMO13757.5prime
TCAGTCGACATGAGTGGAAGTTCTCCCAATTCCATAAGGCCTCTGCCGCC
GGGTCTGCAAAAAGTGGCCATCGAAGAGCTGAACGAAGTGCCAAGTCGTG
TGGAATCGGACATTGCTGCTCTGAAAGAATGGCTACAGAAGCAGCCCCAT
CTCTGCGCCTGTCTCGAGGATCAGTTCCTGCTTAGTTTTCTTAGGGGATC
GAAGTTTAGTCTGGAGAAGGCCAAGCAGAAGATTGATCGATTCTATAGCC
TGCAAGCGGTCATTCCGGAGGTTTTCAACGATCAGCGATTGGTTGACAAT
GCCCAGGTGTTGGAAATTATTCGACTGGGAGTGATCTTGCGCATTCCCCT
CGATGAGGAGGATACTGGACCAGCCGTGACTATTATTCGAGCTGGCTCCT
ACGACATCAATAAATTCAAGTTCCAGGACATCATACGTGTGGGCTCCATG
TTCGGTGAGATCATGATGCTGGAGGATGACAATGCCTCCGTCAGTGGCTA
CCTGGAGATCATGGACATGAGTGGAGTGACGGGTGCAAATCTGTTTGCCC
TCCAACCCCAACTTCTCAGCAAATTCTCGGCCTATGCGGACGAGGCTATG
CCAACGCGTCAGAAGGGAATCCATTTCATCAATGTGCCCAAGGCATTCGA
GACGGGTTTTAAATCACTGCTTGGATGGTTTCCGGGAAAAATCAAGGAGA
GGGTTTCCGTTAGCTCCGATCCGGAAGCTATTTTCGAGCGAGTTCCTAAG
CACTATCTTCCTGAGGAGTACGGTGGCTCAAAGGGCACCATGAAGGATAT
CACCGACCAGATGGAGGCAAAGCTCTGTAGCTATCGCAGCTACTTTGAGG
ACTGTCAGCATTTCGGAGCCCATGACAAGTTGCGCGAGGAAGCCTCAGTG
CTGAACCCAGACGAGAGTCACTTTGGCGTGATGGCTCTTTTCGCCAGTTG
GTCATCGACGCAGCTTTCTAGACCATTCG
FMO13757.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:44:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33965-RA | 1026 | CG33965-RA | 23..973 | 10..959 | 4730 | 99.9 | Plus |
| CG31636-RB | 1567 | CG31636-RB | 498..1025 | 108..635 | 675 | 75.9 | Plus |
| CG31636-RA | 1294 | CG31636-RA | 225..752 | 108..635 | 675 | 75.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:44:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1233276..1233651 | 329..704 | 1880 | 100 | Plus |
| 3L | 28110227 | 3L | 1232904..1233223 | 10..329 | 1600 | 100 | Plus |
| 3L | 28110227 | 3L | 1233704..1233962 | 702..959 | 1245 | 99.6 | Plus |
| 2L | 23513712 | 2L | 6657070..6657329 | 635..376 | 505 | 79.6 | Minus |
| 2L | 23513712 | 2L | 6657449..6657655 | 314..108 | 195 | 72.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:44:11 has no hits.
FMO13757.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:47:00 Download gff for
FMO13757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33965-RA | 23..973 | 10..959 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:22:53 Download gff for
FMO13757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33965-RA | 23..973 | 10..959 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:22:53 Download gff for
FMO13757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1232904..1233223 | 10..329 | 100 | -> | Plus |
| 3L | 1233277..1233649 | 330..702 | 100 | -> | Plus |
| 3L | 1233705..1233962 | 703..959 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:47:00 Download gff for
FMO13757.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1232904..1233223 | 10..329 | 100 | -> | Plus |
| arm_3L | 1233277..1233649 | 330..702 | 100 | -> | Plus |
| arm_3L | 1233705..1233962 | 703..959 | 99 | | Plus |
