FMO13759.5prime Sequence
672 bp (672 high quality bases) assembled on 2013-08-24
> FMO13759.5prime
TCAGTCGACATGAACCTTTTGGCGAAAATCATACTGTTCCTTTTCACTCT
CGAGGCTGTGAGTGCTTTAGAGGCCAATCTCACTTCGTGGCGACATCACA
GAAGGCAAAAGCGGTTCCTGATTTATCAGAATGGCGGTGTAATCAAGTTC
GTTTCGGGATGTGCATTTCCGGCTCCGTTTATGGAGAAAAAGGCATGGCG
CCAGTTGGTTTGGCTGATGAACTTTCACTATCAGTTCAATGAGCCGCAAA
CTCCAATCTACTGGTGGAAACTTTGGGATGGCTCCCGAAATCTCAAGGGA
CCATTGACCCAACCTGCTCCTCCATCCGTTCCAGCTCGTCTTTTGGTGGA
CGAGCCTCAACTTCTGCTATTCAAGTTCGCCGAGGCCTATATGAACCAGT
TGGGTCAAAATGGTAGTGCCTGTCTGGATCGTCTGATCTGCGAGAATGGT
CAGGTGGATGAGCATAGTGGACTCTACGCCCAACTGCTCCACAGGTTGTT
AAGACCTCATCAAACGCTGGACGTGAGATATTTGGATGCCTACAGGATGG
GTCGCCATGGCGTTGACTGCCGAAATGCCTTTCCAGAGGCCCATCATTGC
ATTTTGGATGACTACCTACACCTCCATGAGCGAGGACCGAAACAGAGTTT
TCTTGCAAGCTTTCTAGACCAT
FMO13759.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:43:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13869-RA | 753 | CG13869-RA | 29..675 | 8..654 | 3235 | 100 | Plus |
| CG11099-RB | 2173 | CG11099-RB | 1751..2108 | 503..146 | 1790 | 100 | Minus |
| CG11099-RA | 2319 | CG11099-RA | 1897..2254 | 503..146 | 1790 | 100 | Minus |
| CG11099-RB | 2173 | CG11099-RB | 1546..1698 | 654..502 | 765 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:43:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20238778..20239135 | 503..146 | 1790 | 100 | Minus |
| 2R | 25286936 | 2R | 20238573..20238725 | 654..502 | 765 | 100 | Minus |
| 2R | 25286936 | 2R | 20239197..20239323 | 147..21 | 635 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:43:49 has no hits.
FMO13759.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:46:47 Download gff for
FMO13759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13869-RA | 22..679 | 1..660 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:22:41 Download gff for
FMO13759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13869-RA | 22..679 | 1..660 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:22:41 Download gff for
FMO13759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20238569..20238723 | 504..660 | 98 | <- | Minus |
| 2R | 20239197..20239323 | 21..147 | 100 | <- | Minus |
| 2R | 20238778..20239133 | 148..503 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:46:47 Download gff for
FMO13759.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16126074..16126228 | 504..660 | 98 | <- | Minus |
| arm_2R | 16126283..16126638 | 148..503 | 100 | <- | Minus |
| arm_2R | 16126702..16126828 | 21..147 | 100 | <- | Minus |
