FMO13761.5prime Sequence
731 bp (731 high quality bases) assembled on 2013-08-24
> FMO13761.5prime
TCAGTCGACATGCAGTTGGGAAAAGCTATCATTCTGATTTTGCTGGCGGC
CATCCAGCAAAGCTGCCTGGCTCTCTACATCAAGAGCGCGGAGAAGAATC
CAGCCAAGACTGGGCCCAAGGACGATTGGGGCGTCTTCAAGAACACACTC
GGACTAAGCCAAGAAAAAGTTGAACTGCTAAAATCGCAAAAGGACCAACA
AGGCACTAAGGAGCTGCTCAATCGATTCATTCTGGAAAACCCAAAGGCAC
TGCCGAAGGCCAAGCCACAACCCGATCAGTTCATGGGACTCTACAGATCC
ATCCTGAAGAAGCTGACGGCATCCAAGCGCATGCTGAAGACCTCGTTGAA
CTTTGAACTGGCCGACAGGCCACACGAGACCCTAAAAAGGCCGCGCCGTA
AGATCGCCGTCAAGATGGTTTCCGATATGCCATCATGGAAGATCGAGAGC
CTGCTGAACTCATTCTATCTGAAGCACGGAATTCCACGCAACGCCGAGGA
GCACGATTATCCCGATCTTGACATGGCCAGGGATACTGATTACGAATCCG
ATAATTTCTACGACGACGAGGGAGATGTGGGTCTAACGGCCAAGACGCGC
CAGATCACTGAGTACGGATCCTTCCAGGACCTCATTATGCAGCCAAGATG
AACGAGTGGGAGCGGGAGAGCGAATAAACCAAATTGCACGGCCCCGACAA
TGATGACTACATCGCAAGCTTTCTAGACCAT
FMO13761.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:44:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13653-RA | 937 | CG13653-RA | 34..738 | 10..713 | 3440 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:44:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25195786..25196332 | 168..713 | 2625 | 99.1 | Plus |
| 3R | 32079331 | 3R | 25195560..25195719 | 10..169 | 800 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 23:44:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Paris | 1730 | Dvir\Paris TV1 1730bp Derived from Z49253. | 329..375 | 207..161 | 109 | 70.2 | Minus |
FMO13761.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:47:02 Download gff for
FMO13761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13653-RA | 34..741 | 10..717 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:22:55 Download gff for
FMO13761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13653-RA | 34..741 | 10..717 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:22:55 Download gff for
FMO13761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25195560..25195719 | 10..169 | 100 | -> | Plus |
| 3R | 25195788..25196335 | 170..717 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:47:02 Download gff for
FMO13761.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21021282..21021441 | 10..169 | 100 | -> | Plus |
| arm_3R | 21021510..21022057 | 170..717 | 98 | | Plus |
