FMO13766.5prime Sequence
941 bp (797 high quality bases) assembled on 2013-08-24
> FMO13766.5prime
TCAGTCGACATGTTTGGAGTATTGAAGTTTGGATCCATCCTGGTGTCCCT
CCTATTTCTGGCCACCAGTCATGCGGATGTTTTCGATGAGTGTAACGATG
GTAACAACCTATCCTTTGTTACTTCGCCAAAGAGTTGCGCACATTATATC
TTCTGCAACGGCGATGAGTCATACGATGGTGAATGCGAGGATGGCGAATA
CTTTAGTCAAGATATGGAAATGTGTGAGCCCATGGGCGATATCGACTGTC
GCACGGGATCGGAGGTGCAAAGGGAAAACACTACCGACAGCTCCTCAACG
GAGATTACCTCGGAGTCCAGTACGATTTCCACAGTTGTAATCACCACATT
AGCCCCATCGGCAGTGGTCACATTACGACCATCAGTCAATCAAAGTGGAG
CCAGCAGTACGACTTCCGTATCGCCTGCTATAGAGATTATTGTGACCAAT
GTGTGCCCACAACTGGATAATCAGAGTCGTATCGCATTGCTGCCAAATCA
GAACTCCTGTTCAGATTATTACATTTGCTATCGCGGTGTGGCACTTCCCA
TGAGTTGTGCCACCAGTTTGCACTTTAATTCACTCACCGGAAAATGCGAT
CATCCCGAAAACGTTAGGTGTTTGGCCATGACTTATAATCCCAGGGAGCA
GTGCAAGCGACATGTAATCGATGTTTATCCGCATTCCGACACTGCAATTA
CTTTTACCAGTGTCGCTCTGGCTATTTGATGGTCCAGCAGTGTCCTTTCT
TCTACGGATGGACTACGAGAGCGATCCTGTGTAGCACTAGGTCAAGCCAA
ATGCTACACAAGCTGCAAATGCAAATGAATTTATGCAGCTTTCTAGACAA
TCCGTTGGCGGCGGTCAGTATTGTCTATCCTAATCTATCCTTATCTATCC
CACTAGCTAGGAATCTGTCTGACTATGCTTGAATTCCACAT
FMO13766.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:39:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33985-RA | 860 | CG33985-RA | 6..829 | 10..829 | 4020 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:39:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15526192..15526807 | 625..10 | 3080 | 100 | Minus |
| 3L | 28110227 | 3L | 15525922..15526131 | 829..624 | 850 | 98.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:39:28 has no hits.
FMO13766.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:44:32 Download gff for
FMO13766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33985-RA | 2..836 | 7..834 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:20:39 Download gff for
FMO13766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33985-RA | 2..836 | 7..834 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:20:39 Download gff for
FMO13766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15525917..15526130 | 625..832 | 97 | <- | Minus |
| 3L | 15526193..15526812 | 3..624 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:44:32 Download gff for
FMO13766.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15519017..15519230 | 625..832 | 97 | <- | Minus |
| arm_3L | 15519293..15519912 | 3..624 | 99 | | Minus |
