FMO13767.5prime Sequence
865 bp (865 high quality bases) assembled on 2013-08-24
> FMO13767.5prime
TCAGTCGACATGTCGAACTTCAGTGCCTGCGCAGTGTGCGGCGATCAGAG
CTCCGGGAAGCACTACGGCGTGTCCTGCTGCGATGGGTGCTCCTGCTTTT
TCAAGCGGAGCGTGCGGCGCGGGAGCAGCTACGCCTGCATCGCTCTGGTC
GGGAACTGTGTGGTGGACAAGGCGCGGCGGAACTGGTGTCCCTCCTGCCG
CTTCCAGCGATGCCTGGCCGTGGGAATGAACGCTGCTGCGGTTCAGGAGG
AGCGCGGTCCGCGCAACCAGCAGGTGGCTCTCTACCGCACTGGCCGGAGA
CAAGCTCCGCCATCTCAGGCGGCGCCATCCCCGACGCCCCACTCCCAGGC
GCTGCACTTCCAGATCCTCGCCCAGATCCTTGTCACGTGCCTGCGCCAGG
CGAAGGCCAACGAGCAGTTCGCTCTGTTGGATCGCTGCCAACAAGACGCC
ATCTTTCAGGTGGTGTGGAGCGAGATCTTCGTCCTGCGAGCGTCCCACTG
GTCTCTGGACATCAGCGCCATGATCGACGGCTGCGGCGATGAGCAGCTCA
AACGGCTCATTTGCGAGGCCCACCAGCTAAGGGCCGACGTCCTGGAACTC
AACTTTATGGAGTCCCTAATCCTGTGCAGAAAAGAATTGGCCATCAATGC
GGAGTATGCCGTTATCCTGGGAAGCCACTCTAAAGCCGCCCTGATCTCCT
TAGCCCGCTACACCCTGCAGCAATCCAACTACCTGCGGTTCGGACAACTG
CTCCTTGGTCTGAGGCAGCTGTGCCTGAGGCGCTTCGACTGCGCGCTTTC
TTGTATGTTTCGCAGCGTGGTCAGGGAACATTCTTAAAAACACTTGCAAG
CTTTTCTAGACCATT
FMO13767.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:39:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hr83-RA | 837 | CG10296-RA | 1..834 | 10..845 | 4130 | 99.8 | Plus |
| dsf-RB | 3537 | CG9019-RB | 298..375 | 34..111 | 195 | 83.3 | Plus |
| dsf-RA | 3042 | CG9019-RA | 298..375 | 34..111 | 195 | 83.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:39:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6349242..6349867 | 9..634 | 3130 | 100 | Plus |
| 3R | 32079331 | 3R | 6350299..6350493 | 633..827 | 975 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:39:30 has no hits.
FMO13767.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:44:34 Download gff for
FMO13767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hr83-RA | 1..837 | 10..846 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:20:41 Download gff for
FMO13767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hr83-RA | 1..837 | 10..846 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:20:41 Download gff for
FMO13767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6349234..6349867 | 1..634 | 99 | -> | Plus |
| 3R | 6350301..6350515 | 635..852 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:44:34 Download gff for
FMO13767.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2174956..2175589 | 1..634 | 99 | -> | Plus |
| arm_3R | 2176023..2176237 | 635..852 | 97 | | Plus |
