FMO13769.5prime Sequence
657 bp (657 high quality bases) assembled on 2013-08-24
> FMO13769.5prime
TCAGTCGACATGTTCAAGTCATCGATTTCAATCGTCGTTCTGCACCTGCT
CCTGCTGGTGTCCTTCGGAGGAGCTTACACCCTTCCGCCGGTGGTGCAGA
TGGGTGGTGCAATCGTGGCAGCCGTGGAGCAGGACGCCGAGCAGGAAGCT
GCCGCCGAGGAGCGGCAGCGAGTCGAGCGTCATTGGCTATCGATGGCCGA
AACGCAGTTGCACAGCCTGATCACAGACGATTTGAGCACAGAGGAGGTAA
ACAATATGCTGGAGACCTGGTCTACCGAAGGTCGCGGTAAGCACAAAAAG
CAAAAAAAGCTCATGAAAATGGTGTATCCGCTTCTGGCTGCCGTAGCCGT
TGCCAAAGTTGTTTTGCTACCCTTGATCCTGAAATGGCTTACGGCGCTTT
CGACCTCGTCGTTTGTCATGGGCAAAATCGCTTTGGTCACATCCGGTATT
TTGGCTCTGAAATGGATTTTGTCTGGAGGACATGCACACGATCGCCTGGA
GATAATTCACTCTCATGCACCACTCGTTAAAGGATTACACGCCAGTGATT
TATCCTCCAGCGGAAGCAGTTGGATGCCCATTCGACAGCCCTTTATACCA
TTGGTCTCCAAAGACCCTAACTTGTATAAGCCATTTTTAGCAAGCTTTCT
AGACCAT
FMO13769.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:39:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi13-RA | 1518 | CG15595-RA | 164..795 | 8..639 | 3160 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:39:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6292406..6292766 | 279..639 | 1805 | 100 | Plus |
| 3R | 32079331 | 3R | 6291900..6292174 | 8..282 | 1375 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:39:36 has no hits.
FMO13769.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:44:38 Download gff for
FMO13769.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi13-RA | 159..801 | 1..647 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:20:45 Download gff for
FMO13769.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi13-RA | 159..801 | 1..647 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:20:45 Download gff for
FMO13769.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6291895..6292172 | 1..280 | 98 | -> | Plus |
| 3R | 6292408..6292772 | 281..647 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:44:38 Download gff for
FMO13769.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2117617..2117894 | 1..280 | 98 | -> | Plus |
| arm_3R | 2118130..2118494 | 281..647 | 98 | | Plus |
