Clone FMO13772 Report

Search the DGRC for FMO13772

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:137
Well:72
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13050-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO13772.5prime Sequence

456 bp (456 high quality bases) assembled on 2013-08-24

> FMO13772.5prime
TCAGTCGACATGAAAGGACTGCTACTCATTACAATCGCCTGCTTGACGAC
CTCCATCCTGGCAGCTCCTGCTCCTGAACCCGCTCCAGAACCATCTCCGT
CTCCAGCTCCTGCTCCATCTCCATCACCCAGCATTGGAATCGGAATTGGT
CATGGCTACGGTGGATATGGCCTGGGATTGGGTCTAGGAATCGGGCACTA
CGGAGGACTCTACGGGCACGGCTATGGCGGGCACTATGGAGGTCTTGGTC
TGGGATTGGGCTACCATGCACCCATCATCTCCAAGACGATCATCGGCAAA
AGCTACTTGGGCGGCTATGGCTATGGCCTCGGTCACGGATATCTCGGAGG
CTACGGCCATGGACTGTACGGAGGACACGGTCTGGGTCTGGGTCTGGGTC
TGGGATACGGACTGGGATATGGCTATGGCCACGGTTGGGCAAGCTTTCTA
GACCAT

FMO13772.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:39:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG13050-RA 694 CG13050-RA 63..491 10..438 2145 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:39:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16278661..16279080 438..19 2100 100 Minus
Blast to na_te.dros performed on 2014-11-28 23:39:44 has no hits.

FMO13772.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:44:44 Download gff for FMO13772.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13050-RA 54..491 1..438 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:20:50 Download gff for FMO13772.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13050-RA 54..491 1..438 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:20:50 Download gff for FMO13772.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 16278661..16279090 5..438 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:44:44 Download gff for FMO13772.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16271761..16272190 5..438 98   Minus