FMO13775.5prime Sequence
1037 bp (940 high quality bases) assembled on 2013-08-24
> FMO13775.5prime
TCAGTCGACATGTCTATCAGACTGAACGATGACGCGATGCGGCAGTTCCG
GGTGGCCAAGGTGTTCCCGGAGACAAAGCACCACACGCTTGCAATGGAGT
TCTCCTCGGACGGACTGCGCCTGCTGGTCTGCGACCACTCCGCCCTCTCG
ATCTTCAGCAGCACTCGACAGGTGCAGGTCTGCAAGGTGCCTATGCACCA
CTACCTGCCCGACGTGGCCTGCTTCGTCCAGCAGGACACTCGCGTCCTGC
ACTCCACCTCAAAGCATGACTACACCATCCGATGCCTGGACCTTAATACC
CGCCACTGCGTTCGAGTTTTCGGTGGCCATGCAAAGACTATCAATAGGCT
GGCCTCCCAGCCTGGAGGCGAGAATGTGTTCATCAGTGCCGGGCGGGATG
ATCAGGTTTACATGTGGGACATTCGGGTCAAAACTCACACACACCGCATA
AAGAATCTGCGACGGCCACTGTGCGCTTTTGATCCTGAGGGCTTGTTCCT
GGCCACCAGTTCGGGCACGGAGGGCATCCAGATCCGCGATGTGAGGATGA
TGGGCGGTGAGCCGAGCCGAAAGTTCGTATACCAGGTGAACGCCAAGGCC
AATTGGACACAGTTGCAGTTCGCTCCCAACGGGAAGAGCCTGCTGCTGAG
CACGGATCACTCCTGGTGCTTCAGTGTCTCGGCCATTGATGGTACCTACC
AACAGTCCTTTACTGGCTATTCGAATAAGTTAAGGCTGCCGTTGGATGCC
ACTTACACGCCGGACTCGCAGTTCATCCTTTCGGGAGCGGATAAGGCAGG
ATTCACATTTGGCGCGCTGCCGATGGATTTCCTGTGCAGTCCTTAAAGGC
AACATATGGGTCCTGTTCGATGCATGCGCTTCAATCCGAGAGCCACCATG
TTCGTGAGCAGCGACTCACGAATCGTGTCCTGGATGCCATGGCGAATGAG
TTACGATTGGGTGAAACGCTTGAAGCCCGGCGAAACCATTCTCTTTACGG
AAGGAACTGGAAAGGGTAGAAGGCTGTCTCATGCTCC
FMO13775.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:39:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3515-RA | 1511 | CG3515-RA | 72..1094 | 10..1028 | 4725 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:39:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2551579..2552331 | 1009..263 | 3305 | 97.5 | Minus |
| 2L | 23513712 | 2L | 2552500..2552754 | 264..10 | 1275 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:39:53 has no hits.
FMO13775.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:44:51 Download gff for
FMO13775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3515-RA | 63..1077 | 1..1009 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:20:55 Download gff for
FMO13775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3515-RA | 63..1077 | 1..1009 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:20:55 Download gff for
FMO13775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2551579..2552329 | 265..1009 | 97 | <- | Minus |
| 2L | 2552500..2552759 | 1..264 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:44:51 Download gff for
FMO13775.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2551579..2552329 | 265..1009 | 97 | <- | Minus |
| arm_2L | 2552500..2552759 | 1..264 | 98 | | Minus |
