FMO13785.5prime Sequence
907 bp (907 high quality bases) assembled on 2013-08-24
> FMO13785.5prime
TCAGTCGACATGGGCAAGGATCAGCATTTGCTGGAGGCTTCGCGAGCCGG
CGACATCAAGACGGTGGACAAACTGCTGGAGCACTCGAGCAAACGACATG
GCCCGCTGTCCAGTTTTAGGCGAAGTCCCAGCATCAACTGCCAGGACATG
AATGGCTACACTTCGCTGCATCACGCCTGTCTAAATGGGCATAGCAACAT
TGTACGGCTACTACTCTCCCACAACGCGCTGTTGGATGTGCCTGATATAC
GTGGCTCGACACCTTTATTTCTGGCTGCCTGGGCTGGGCACCAGGACATC
GTCAAGATGCTGTTGATGCACTCGCCTACGGGAGCCAATCCGAATGCCCA
GACTATCGAAAACGAGACGCCGCTGCACTCAGGCGCCCAACATGGCCACA
ATGCCGTGGTGGCCATTTTGCTGTCCTATGGCGCCGATCCTGCCATACGC
AACAATAGCTTTCAAACGGCTCTGGATTTGGCAGCGCAATTCGGACGCCT
TCAGGTGGTTCAGACCTTGCTCCGTGTTTATCCCGACCTCATATTGCCGT
ATAAGCGTTTGGAAGATGACAATGAAGAGCTGCTGGGCTGCATGCCCATA
AAGCACATATTCACGCACACCTGCCTGCACCTGGCCAGCAGGAATGGGCA
CAAGAAGGTGGTGGAAACACTGCTGGCGGCCGGCGTCGATGTCAACATAC
TCACCAACGCTGGAAGCGCTCTCCACGAGGCGGCTCTCTGTGGCAAAAAG
TCCGTTGTGGTCACTCTGCTTAAGCCGGTATCTACGTACACGCCACCGAT
GGAAACGGACGCACAGCCCTGGACATACTCTCCGATTACCCGCCGCATGT
GACCTACGACATTGTGGGCGCCATAAACGGTGCGTACGAGCTAGCTTTCT
AGACCAT
FMO13785.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:40:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11168-RE | 2903 | CG11168-RE | 155..1025 | 10..879 | 4315 | 99.8 | Plus |
| CG11168-RD | 2945 | CG11168-RD | 155..1025 | 10..879 | 4315 | 99.8 | Plus |
| CG11168-RC | 3249 | CG11168-RC | 190..1060 | 10..879 | 4315 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:40:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24918814..24919594 | 111..890 | 3840 | 99.7 | Plus |
| 3R | 32079331 | 3R | 24918652..24918755 | 10..113 | 520 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:40:19 has no hits.
FMO13785.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:45:07 Download gff for
FMO13785.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11168-RC | 184..1067 | 1..887 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:21:12 Download gff for
FMO13785.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11168-RC | 184..1067 | 1..887 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:21:12 Download gff for
FMO13785.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24918646..24918755 | 1..113 | 95 | -> | Plus |
| 3R | 24918817..24919596 | 114..893 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:45:07 Download gff for
FMO13785.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20744368..20744477 | 1..113 | 95 | -> | Plus |
| arm_3R | 20744539..20745318 | 114..893 | 99 | | Plus |
