FMO13786.5prime Sequence
816 bp (816 high quality bases) assembled on 2013-08-24
> FMO13786.5prime
TCAGTCGACATGGCAAACGTGAAGATCCAAGCGCCCACTTTCGGAGCAGG
TGAACAGGTATCTTTAGGTGGCCAAGGGCTTACCGATATTCCGAGCACGA
GGCATGCGAATATCATTTCAGTCAAAATTCGTTTTCGGGTGAAAACAGTA
ACTGGAGCATTTTGGGAAATTCAAAGTCTACACAAAATTCAAAGAATGGG
GCGAAAAAGGGGTCGAAAGGAGTATTGTCCCCCCATTTACAAGCGCCAGA
AAGTGGCGCGCGTCACTAACAATGGATACCTCAACTTTATGACCGAGTAC
AAGAAACGCTTTTACGGACTTTCTCCGCAGGACATGGTGCATTATGCGGC
TAAGCAGTGGACCCAGCTGTCCATGGCTGAGAAGGAAGCTTTCAAGAGCA
AGAAACCATCGACGATTACTTTGAAGAGTCCAGCACAGTACGTGGCCTGT
GAGATGAAAAGCGATGTCGCCGGAGGACAGCAAAGTTCTTGCCAAAGACA
GTCTCCAAGCGCTCGGCTGAGGGAATCGGAGAGGAGATCGTCCAGATCGA
AGACCTTGTGCAGATCAGCAAAGAATCGTCAGCGAGGGAAGCCGAAACCT
CAGCAAAGCAAGCGAAGGCTCAGTCACATGGGCTCGGCAGTGGCATATAT
CCACTTCCTGCGCAAGTTCCAAAGGAAGATACTGAGTTGCGCACCATCGA
TCTGCTGAAGACGGCAACTAGATTGTGGTGCCGGGTTGCCCGAAAGGCAT
CGCCATGCGTTTGAGAGGCCACTTTGGATTGTTACTATAGGAAAATCCGC
AAGCTTTCTAGACCAT
FMO13786.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:40:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15510-RB | 1053 | CG15510-RB | 157..945 | 10..798 | 3825 | 99.1 | Plus |
| CG15510-RD | 769 | CG15510-RD | 1..661 | 138..798 | 3230 | 99.4 | Plus |
| CG15510-RC | 745 | CG15510-RC | 1..637 | 138..798 | 2860 | 95.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:40:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29836886..29837263 | 400..777 | 1780 | 99.2 | Plus |
| 3R | 32079331 | 3R | 29836530..29836832 | 100..402 | 1470 | 99 | Plus |
| 3R | 32079331 | 3R | 29836106..29836198 | 10..102 | 465 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 23:40:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| blood | 7410 | blood BLOOD 7410bp | 1169..1237 | 689..758 | 140 | 68.6 | Plus |
FMO13786.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:45:10 Download gff for
FMO13786.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15510-RB | 151..951 | 3..805 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:21:14 Download gff for
FMO13786.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15510-RB | 151..951 | 3..805 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:21:14 Download gff for
FMO13786.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29836100..29836197 | 3..101 | 95 | -> | Plus |
| 3R | 29836532..29836832 | 102..402 | 99 | -> | Plus |
| 3R | 29836889..29837262 | 403..776 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:45:10 Download gff for
FMO13786.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25661822..25661919 | 3..101 | 95 | -> | Plus |
| arm_3R | 25662254..25662554 | 102..402 | 99 | -> | Plus |
| arm_3R | 25662611..25662984 | 403..776 | 99 | -> | Plus |
