FMO13791.5prime Sequence
579 bp (579 high quality bases) assembled on 2013-08-24
> FMO13791.5prime
TCAGTCGACATGCGGAAGGTGCAGGCTTTGGTTCAGACGCGCGACGGCAA
GAAGACCGTCTACGAGGTGGATCGCTTAGGAACGGTGGCCAGCCTGAAGG
CACGGATCGGGCAAGCCATGTCCGTGCCCATGGGCTTCAGTCGGCTGTCG
TACAAGGGTCGCGTGCTATCCAATCAGAGCGTACTGGAGGATTTGGGGCC
CAATAAGTCCACCCTGGATCTCACCTGGAAGCCGGTCGTCCTGACGGCCA
ATCAGAGCAGCAAGTTAAGCAAGTTCGGCTATGGCAGGATAGACGATAGT
GAAGTTATGTTTACACTGATCGGCGGCTACCAGCAACGCGAAGAATATCC
TGGTGGCATAGTCAATCCACCGGACGACGAAAGTCAACAAAACTTCAACG
CAGGTGACGATGATGATGCACTGGAGGCCCAGGACATGACTGGACACGAT
TTGTCCTCAATTCAAACCGATGATTTATCGCTCAAAGGCCAGACGGAACC
GGAGCTGGATTGCTCCATTGGATCTCATGGATTCTCTGGATCTCAAGAAG
AAGGCCAAGAAGCAAGCTTTCTAGACCAT
FMO13791.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:44:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33223-RB | 689 | CG33223-RB | 67..618 | 10..561 | 2760 | 100 | Plus |
| CG33223-RA | 1114 | CG33223-RA | 492..1043 | 10..561 | 2760 | 100 | Plus |
| CG32713-RB | 796 | CG32713-RB | 73..624 | 10..561 | 2625 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:44:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8465761..8466312 | 561..10 | 2760 | 100 | Minus |
| X | 23542271 | X | 8457009..8457560 | 561..10 | 2625 | 98.4 | Minus |
| X | 23542271 | X | 13402370..13402714 | 339..10 | 810 | 84.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:44:17 has no hits.
FMO13791.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:47:04 Download gff for
FMO13791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33223-RA | 487..1046 | 1..565 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:22:57 Download gff for
FMO13791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33223-RA | 487..1046 | 1..565 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:22:57 Download gff for
FMO13791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8465758..8466317 | 1..565 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:47:04 Download gff for
FMO13791.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8359791..8360350 | 1..565 | 98 | | Minus |
