FMO13792.5prime Sequence
898 bp (898 high quality bases) assembled on 2013-08-24
> FMO13792.5prime
TCAGTCGACATGCTCAACTCTTTGGCCAAGAGAATTGTGCTTATGCCCAG
CCTTATAGCACTGGAGGATACTTGTCGAACTATTCACGTTACCGCCCTAA
TGGCGAGGATGGGAAAGGATTTCTGTCCCGTGAGTGAGGTTCCCGACTGC
AAAGTGGTGAAGAAGCGACCGTGCAGTCCCACGGATCCACCTGTTCGTCC
TTGCAGCGAGGAGGGCTGCACCCAGCCGCGATACTCATGTTGCGTGAGTA
CCGGCATTTCGGCGAATCCATGCGCTGATCCAAGCAAGAAGACCAAGTTC
GTTTCGATGTGGAAGAGATACAAGGATGATGGTAGTAATCGGCCAGAAGC
TATGTGGCACTACCCGGAGGAGTGCTGTCCAAAGTGTGAGGATACGCGAT
TTGACGTTTTGTACTATACACCGTCGGACAAGTGCCGGGAGTTCCAGCGC
ACCTGGTGGGAATGCTGTCCAAAAATGGTACCGAAGCGGGTCTGCTGCTG
GTGCGACGCCATTCCACCGGAGGTCCTGCGGCGAGATTTGCCCATCTGCC
CGCGATCCGCTTGTCTCGCAGAACATGAGAGGAAGCGCTATAAGTGCCTA
AACAAAAGGTACAAAGGTTGCATGCGTATCCGTATGCCGTGTTGTCGAAC
CGCTCGAATACCGCCCGACTGCAGGGCATTCCCCGGTCCTTCCGATTGCG
AGAAGATCAAGTGCCCGTTCCCGAGTTACTCCGAATGCGTTCAGGAGGAT
CCCGCTGTTATCCCAACCCGGCCACCAGAGTGTGAGTGCTTGAAAAAGGC
GTCTCAGTGCGAGCAGATCCGACGAGGACGGCACATGGAAAACAACGACA
TAAGCATCTGGGCGTGTACTTCCAGGGGAGAGCAGCTTTCTAGACCAT
FMO13792.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:44:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| spaw-RB | 2691 | CG30365-RB | 57..927 | 9..879 | 4340 | 99.9 | Plus |
| hubl-RB | 2691 | CG30364-RB | 57..927 | 9..879 | 4340 | 99.9 | Plus |
| hubl-RA | 1061 | CG30364-RA | 57..927 | 9..879 | 4340 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:44:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8361230..8362100 | 879..9 | 4340 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:44:20 has no hits.
FMO13792.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-24 18:47:06 Download gff for
FMO13792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spaw-RB | 49..929 | 1..882 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:22:59 Download gff for
FMO13792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hubl-RA | 49..929 | 1..882 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:22:59 Download gff for
FMO13792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8361228..8362104 | 1..882 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-24 18:47:06 Download gff for
FMO13792.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4248733..4249609 | 1..882 | 99 | | Minus |
