FMO13804.5prime Sequence
348 bp (348 high quality bases) assembled on 2013-10-14
> FMO13804.5prime
TCAGTCGACATGTCCATCGTCCTTGATGTTATCCAACAAGTTGTGTTGCA
GAAAGCTTACGATCTAACATGCGAGGCAGCCATTTTAGCCTTGAGAAAAT
GTGGCAAACTGAAAATAGAGGATGGTAAATCGAAAGCAAAGCGTGAAAAG
CCTCTACCTCCGGTCAAGCCTATTTCCCAGGAAGCGGTTTCACCAATGAA
AGCTCCAACGATTCCCGAGGCTAACACCATTCCAAAATATACGGGACGGG
ACATGCCTCGAAAGAACTTTGGCTCCATCGATCCCCCCCAATGCTCCTGC
ATGCGTGTGTGCCGAGATAGTTACTTCTCTGCAAGCTTTCTAGACCAT
FMO13804.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:50:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33655-RB | 2164 | CR33655-RB | 55..375 | 10..330 | 1605 | 100 | Plus |
| CG33655-RC | 2168 | CG33655-RC | 55..379 | 10..330 | 1555 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:50:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21319582..21319803 | 330..109 | 1110 | 100 | Minus |
| 2R | 25286936 | 2R | 21319861..21319963 | 112..10 | 500 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:50:51 has no hits.
FMO13804.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-14 12:23:30 Download gff for
FMO13804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33655-RB | 46..375 | 1..330 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:49:16 Download gff for
FMO13804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33655-RB | 46..375 | 1..330 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:49:16 Download gff for
FMO13804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21319582..21319803 | 109..330 | 100 | <- | Minus |
| 2R | 21319865..21319970 | 1..108 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-14 12:23:30 Download gff for
FMO13804.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17207087..17207308 | 109..330 | 100 | <- | Minus |
| arm_2R | 17207370..17207475 | 1..108 | 96 | | Minus |
