FMO13812.5prime Sequence
1067 bp (1020 high quality bases) assembled on 2013-10-14
> FMO13812.5prime
TCAGTCGACATGGCCAAACGCGATATCCTGCCCATCTTTCCATCCCGCGC
CAATTCGGTGATCATGAAGCAGCGCGTTTTGGCGGCTAGAAGGGGCGTGG
GTCTCCTCAAGCGGAAGCGGGACGCCATCGATATGAAGCTACGCGAATTG
CGTCGCATCCGCTTCGACCAGGACATGCACGGCGATGAGGCGATGCGCAA
TGCCATATTCTCGATGGCAAAGGCCAATCTTCTGGGCGCCGATTTCAAGC
CGCAGATGGTAAGCCGCAGCCACGTGGCAACCGTATCGCTACGCCGCACG
GAGATCAAAATTGTGGGCGTCAAGCTGAACACCCTGGAGCTGGAGACGAA
GGGCGTGGGCGCTTTTCCGCTGGCTGGTCTCAGCTGTGGCGGTATGCAAG
TGAGCCGAATCAGGGACTCCTATACGAAGGCACTCAAGGCACTGGTGGAG
TTCGCCTCCCTGGAATACCAAGTGCGAATGCTGGAGGCGGCCTCGTTGCA
GACCAACATGAGGGTCAATGCTCTGGAGCATGTGGTAATACCCATCCTGC
AAAATACCTATAACTATATATGCGGCGAGTTGGAGGAGTTCGAGCGCGAG
GATTTCTATCGCCTGAAACGCTCCCAGGCGAAGCAGCTGGAGGCCAAGAT
GGCCTTCACCGAGCTGATCAAGACCAAGAACATGACCGACGAGGAGCTGG
AGACCTACATAAAGCGAAACATAAATCAGACGCGTCCTCCAGCGGCCGAC
ACACCCTTCGATCAGGAGCAGTTCGAGGAGCGTGAGGTGAAGCGGCGCAT
GCGGGAGGCCCGTCTGTCCCTAAAGCAGCGCCGCGAGCAGGAGAGAAAGG
AGGCCATCAAGCGGGGCGAGCCCCCACCGCCCACATCCTTCATCACCACC
ACGGAGCCTCGTTGAGTTTCGCTGGGTCGCCAGCGGGATCCGCGAGCCAG
CAGTTGTGATCTGTACAGCACCAAGCGGATGCTCCTCTCCTCGGGACGGA
AGGGAAGTCCGGCCAGTAATGGTGACCGAAAAGGAAGTTCCGATACCTCT
CTCCGCCGTAATGACCA
FMO13812.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:54:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vha36-2-RA | 1296 | CG13167-RA | 73..1120 | 9..1062 | 4955 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:54:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12257354..12257884 | 9..539 | 2625 | 99.6 | Plus |
| 2R | 25286936 | 2R | 12257954..12258432 | 534..1011 | 2205 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:54:21 has no hits.
FMO13812.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-14 12:25:08 Download gff for
FMO13812.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vha36-2-RA | 66..1123 | 1..1066 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:52:12 Download gff for
FMO13812.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vha36-2-RA | 66..1123 | 1..1066 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:52:12 Download gff for
FMO13812.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12257347..12257879 | 1..534 | 99 | -> | Plus |
| 2R | 12257955..12258479 | 535..1066 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-14 12:25:08 Download gff for
FMO13812.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8144852..8145384 | 1..534 | 99 | -> | Plus |
| arm_2R | 8145460..8145984 | 535..1066 | 97 | | Plus |
