FMO13814.5prime Sequence
716 bp (716 high quality bases) assembled on 2013-10-14
> FMO13814.5prime
TCAGTCGACATGGCCGACGGCTTTAAGAAGTACTTCAATGGGACAACCAT
CAATGGACGCGCTAACGTGGCAAAGGCCACATACGCCACGTTGGCCCTGT
TGTTCATCGTGTACAAGCTGCGCCGCGGATCCGGCAAGACCGGCGAGTTG
GCCAGCGGCAAGTGCAGCTGCGAATCGGACCACGAGTCGTCCCTCAATGG
CGACATTGGCGTCTACGGCGCGGATCCCGACTGCTCCGTTTGCCGGGAGC
GATCGGAGCGGGCCATGACCGAGTTCGATCGCGAGCAGCAGCGCCGGGCG
GCGGGCGAGGATGACAATGGTTGTCGCGACGATCCGCCGCCGCCACCACC
TCCGCCCACATCGGGAGGATCAGGCTCTGCTCCGCGGCGCAAGTGTCCCT
GCGAGGAGCCGCAGCGTCGGGCGGAGGGAGCCGTGAAGCATAGCAGCCAC
AGCAGCTGGGCGCGAGGCCAGCAGATTCAGCCGCCAAACCAGTACCAACA
GTATAAACAGCCCGAGGCGGAGCAAGTGCGTCCGGCTAGCCAAGTGATGG
GTCAGGTGCACGACGCCTTCTACAGGGTGCTGCGAGGAGTCGTGGGAGCC
GTTTTGGGCAATGCGGCGGTCAACACCAGCGGCACCGCTTCCGATTCCCC
AGCTCAGGCAGCCGCAGTGGAAGTCTCGCGGGATGAGCTGGACGAGGATG
AACCGTGACGACGGCC
FMO13814.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:51:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15459-RA | 1072 | CG15459-RA | 85..790 | 10..716 | 3510 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:51:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20412623..20413271 | 716..67 | 3200 | 99.8 | Minus |
| X | 23542271 | X | 20413439..20413497 | 68..10 | 295 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 23:51:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6813..6884 | 442..511 | 139 | 68.1 | Plus |
FMO13814.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-14 12:23:38 Download gff for
FMO13814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15459-RA | 75..790 | 1..716 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:49:30 Download gff for
FMO13814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15459-RA | 75..790 | 1..716 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:49:30 Download gff for
FMO13814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20412623..20413271 | 67..716 | 99 | <- | Minus |
| X | 20413441..20413502 | 1..66 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-14 12:23:38 Download gff for
FMO13814.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20283650..20284298 | 67..716 | 99 | <- | Minus |
| arm_X | 20284468..20284529 | 1..66 | 93 | | Minus |
