FMO13824.5prime Sequence
681 bp (681 high quality bases) assembled on 2013-10-14
> FMO13824.5prime
TCAGTCGACATGTTGGACTTCTACTATATGCTCTACTCGGCACCTTGCCG
TTCCATCCTGATGACGGCCCGTGCCCTGGGATTGGAGCTGAACAAGAAGC
AGGTGGATCTGGATGCCGGCGAGCATCTTAAGCCGGAATTTGTAAAGATC
AATCCTCAGCATACGATTCCCACGCTGGTTGACGATGGTTTCGCCATCTG
GGAGTCGAGGGCTATACTGATTTATCTGGCCGAGAAGTACGATAAAGATG
GCTCCCTTTATCCCAAGGATCCCCAGCAGAGAGCCGTGATCAATCAGCGC
CTGTTTTTCGATCTGAGTACTCTGTACCAGAGCTACGTGTACTACTACTA
TCCCCAGTTGTTCGAGGATGTGAAGAAGCCAGCTGATCCCGATAACCTCA
AGAAGATCGATGATGCTTTCGCTATGTTCAATACTCTGTTGAAGGGTCAG
CAGTACGCCGCCCTCAACAAGTTGACTCTGGCCGATTTTGCGCTTCTGGC
CACCGTTTCCACTTTTGAAATATCGGAATATGATTTTGGTAAATATCCGG
AAGTGGTTAGGTGGTACGACAATGCCAAGAAAGTGATACCCGGCTGGGAG
GAGAACTGGGAGGGCTGCGAGTACTACAAGAAATTGTATCTGGGTGCGAT
TTTGAACAAACAAGCAAGCTTTCTAGACCAT
FMO13824.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:54:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstD9-RB | 786 | CG10091-RB | 51..705 | 9..663 | 3275 | 100 | Plus |
| GstD9-RA | 775 | CG10091-RA | 40..694 | 9..663 | 3275 | 100 | Plus |
| GstD1-RB | 843 | CG10045-RB | 95..443 | 16..364 | 425 | 75.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:54:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12366244..12366898 | 663..9 | 3275 | 100 | Minus |
| 3R | 32079331 | 3R | 12368217..12368565 | 364..16 | 425 | 74.8 | Minus |
| 3R | 32079331 | 3R | 12372115..12372340 | 130..355 | 350 | 77 | Plus |
| 3R | 32079331 | 3R | 12374270..12374452 | 130..312 | 300 | 77.6 | Plus |
| 3R | 32079331 | 3R | 12373214..12373371 | 145..302 | 265 | 77.8 | Plus |
| 3R | 32079331 | 3R | 12365221..12365423 | 334..132 | 220 | 73.9 | Minus |
| 3R | 32079331 | 3R | 12372538..12372594 | 559..615 | 195 | 89.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:54:34 has no hits.
FMO13824.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-14 12:25:14 Download gff for
FMO13824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstD9-RA | 34..694 | 3..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:52:19 Download gff for
FMO13824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstD9-RA | 34..694 | 3..663 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:52:19 Download gff for
FMO13824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12366244..12366904 | 3..663 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-14 12:25:14 Download gff for
FMO13824.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8191966..8192626 | 3..663 | 99 | | Minus |
