Clone FMO13832 Report

Search the DGRC for FMO13832

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:138
Well:32
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG13300-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO13832.5prime Sequence

434 bp (398 high quality bases) assembled on 2013-10-14

> FMO13832.5prime
TCAGTCGACATGCCATCCGTAGCAAACAGCAACTACAGCAACGATGCGCG
TCTCGGTTACGTCGTAAATCAAGTTGCATCCGTATCTGTGTCCATATCCG
CATCCGCATCCGCCCTGCCCTCCGTATCCGCATCCGAATTTCCTACTTTC
AGTCCACCGCGGATTGCCAGTCTGGTGGCCAGCAGCTCCGCGGAGGACTT
GAGCAGCTTTGGTGACGTGACGTTCGACATCTTCGATGACGATGACGACT
TGTTCGGCTCGCCAATGGCCTTTGATGCCAGCGAACAGGGCCTCTGGAAC
GGACGCTTTGTACCGCCACCGCCCCGCCCGCCTTTCTTCGTCGACGAGCC
GGTGCTGAGCGACGGCCTGACCACGTGTGATTTGTGCTCCTGGGCGATGC
CCACCAAGAGCACATTCTTGTTCGAGGGAACGAT

FMO13832.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:51:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG13300-RA 4303 CG13300-RA 1431..1855 10..434 2095 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:51:48
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6332472..6332896 434..10 2095 99.5 Minus
Blast to na_te.dros performed on 2014-11-28 23:51:49 has no hits.

FMO13832.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-14 12:23:59 Download gff for FMO13832.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13300-RA 1425..1855 3..434 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:50:16 Download gff for FMO13832.5prime
Subject Subject Range Query Range Percent Splice Strand
CG13300-RA 1425..1855 3..434 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:50:16 Download gff for FMO13832.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 6332472..6332902 3..434 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-14 12:23:59 Download gff for FMO13832.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6325572..6326002 3..434 98   Minus