FMO13834.5prime Sequence
913 bp (793 high quality bases) assembled on 2013-10-14
> FMO13834.5prime
TCAGTCGACATGGAAGTGCCCACCGTCAGGAGTCCCCAGCGGGAAGCCGA
GGCCATTAAGGTAAACATGGCCAGCATTGAACAGAACATCCAGAAAGCCT
TGACTGCCGAGGAATACGAAAATATCTTAAACCATGTAAACAGCTACGTG
CAGCAGTTGGTCGAGCTGAAAATGCAGCAGCATTCCAAGGAGCTCGCACC
GCAACAGATTGAACTCTTTGTTAAGCTGATGAAGGAAAACCTCAAGCAGA
TTATGTACAAAACGGAGCTAAGCGAAAAGGATTTGTCTGATCTGGCCATA
AAACTGAAACTGGAGCTGCAAAGCTCAGGCGGTTGGCAAGATGGAGCGAA
ACTATCACAAGCTAACTTAGAGGAGATAACCAAGCTAATTAAAGCAGAGG
TTCACCTCCACGAATCGCACTACACCATTCAATTGGACAGGATAGACTTT
GCATCCCTGCTGGAGCGTATTCTTGCTGCGCCGGCATTGGCAGACTTTGT
AGATGCTCGAATAAGTCTTCGGGTGGGAGAGCTCGAGCCAAAGGAGAGTT
CCGGTTCCTCAGATGCAGAAGTCCAAATTGAGCGTCTGAACAGGGAAATC
GCCTTCATTAAGTTGGCTCTCTCTGACAAGCAAGCGGAGAACGCCGATCT
GCACCAATCAATCAGCAATCTGAAGCTCGGGCCAGAGGATTTGCTGGACG
CATACAGCAGCACGAACTTTCCCAGGATAGGCGCTCACGGGTGCTGGCTG
AAATAGAAAACAACTGTCTGCGCTAACGACTCGCAGTTTGCTCTTCTCAA
CAGCAGATCAGCTATCCCTGTCGAAATCTGGCTTAGCATCCACCGCTGGC
GTCGCTTCCATTGATGACTCGATCTGCAACTGGTACCGACAATGTTTGTG
GGCAGAACTACCT
FMO13834.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:51:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| koi-RC | 4233 | CG44154-RC | 1348..2203 | 10..851 | 3905 | 98 | Plus |
| koi-RB | 4100 | CG44154-RB | 1215..2070 | 10..851 | 3905 | 98 | Plus |
| koi-RA | 4276 | CG44154-RA | 1391..2246 | 10..851 | 3905 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:51:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 6815194..6815992 | 10..802 | 3685 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:51:22 has no hits.
FMO13834.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-14 12:23:44 Download gff for
FMO13834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| koi-RA | 1383..2255 | 1..863 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:49:42 Download gff for
FMO13834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| koi-RA | 1383..2255 | 1..863 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:49:42 Download gff for
FMO13834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 6815186..6816058 | 1..863 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-14 12:23:44 Download gff for
FMO13834.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 2702691..2703563 | 1..863 | 96 | | Plus |
