FMO13847.5prime Sequence
258 bp (258 high quality bases) assembled on 2013-10-14
> FMO13847.5prime
TCAGTCGACATGATTTGCGTATCACGTCTGGTCATCATCAATTTGCCCAG
TGTCTGGTCATCCAAGAGATCCAAAGACTCGGAGGAAAAGGATAGCAAAG
ATTCTGTAAAGCCAGCTGCACCCAGGGATTTTCAGAGACCTTTGCAGATC
CACACAAAAAGGGGCTACATCAAGTGGTTCAACAAGCTGAGTCGCTGCCA
CAAAACTCGTCATTTTTCAGGCAGAATGCATCCCAGGCTGGCAAGCTTTC
TAGACCAT
FMO13847.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:52:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43059-RA | 377 | CG43059-RA | 99..329 | 10..240 | 1140 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:51:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8318590..8318731 | 240..99 | 695 | 99.3 | Minus |
| 3L | 28110227 | 3L | 8318778..8318868 | 100..10 | 455 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:51:59 has no hits.
FMO13847.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-14 12:24:02 Download gff for
FMO13847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43059-RA | 99..329 | 10..240 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:50:26 Download gff for
FMO13847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43059-RA | 99..329 | 10..240 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:50:26 Download gff for
FMO13847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8318590..8318729 | 101..240 | 99 | <- | Minus |
| 3L | 8318778..8318868 | 10..100 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-14 12:24:02 Download gff for
FMO13847.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8311690..8311829 | 101..240 | 99 | <- | Minus |
| arm_3L | 8311878..8311968 | 10..100 | 100 | | Minus |
