FMO13850.5prime Sequence
1108 bp (1002 high quality bases) assembled on 2013-10-14
> FMO13850.5prime
TCAGTCGACATGAACAGAAAACACAATAAGATATCTCATAGCGGGTCCCA
CATGCACGGTATCAAGGTGGAACCCAAAAAGTACTCGCCCCAGGAGTACA
GGGAGAAAATTCTTAGCCTGTTTCCGCTTCCGCCGAGACCGGCAAATATG
TGCCACGATGCGTTCGTGAAGAAACTTCTGGAGCCCTATGTCCTAGAGAC
CAAAGAGGTGGTCCGAGCCGTAAAGATGACCCGTGATTCCACCGGGGAAG
ACTCTAGTGAGGATACATACGAGGCGTTCCGGGCAAAGATGTACAAAACG
AACTACACGGCACGGGCCACCGTATACATGGCACGGGCCACCATTTTAGC
CAGGACCAGTGTCAAGTCAATCCTTAGTCCCGAGCAACGAGATTCGGCAG
CCCAAACGACCCAAATGTTCAAGGTGCGCTTTGCAAACCTAATATCCGAC
TTTCGGAACGTGTGCATCATCTACCAGCTGCTGCAGCTGCAAGAAATCCT
CAATGTGATGCGGGAGTATCCGCCAGCTGGCACCAATCCCAACGACACCA
TCTTCGGTTGGTCCTACAAGGAGAATCTAAAGCGTTTTGAACAGCAACCG
AGCACCGTCTATGTGGACATTCTGGAGAAGAACAAGCCGGAGGCGACGCT
TGACGACCTTAAGTTTTATGTGGATTTGGGAGAGCTAATCGGTCTCGTGC
AGGCCCTCCTAGACGATGTGATCCACGACAGGGATCTCTGTGCGCCCAAC
GGCTTCATGGAGCTTCTTAAGGACACACAAGTTGATATCGACAAGCTGAT
AGCTCTGCCCTACGAGACCATAATGGCCGAACACGATTCCTTACTTGAGG
AGGACGAGAAAAAGAATCGGGTGGGGAAGTTTCACCAATCCGAAACTACG
GGCCAAGCAGCACGCACTCACAGGACGATTCCAGATCGGACTACATGAGC
CCGATCGAATCCCGGCTAATAAAGGTGAATTGGACCACGATGTTGGGGGA
CCCAGGGTTCAATACACTGGATTTCTACGCTGCAAGGTCGTTTCCCGAAC
GGCCTAGTAAGAATTGAGAGCTCATGGACACGATCTCGAGTGTGTGGGAG
GACTGCCA
FMO13850.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:52:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33322-RA | 1599 | CG33322-RA | 65..1158 | 10..1108 | 4755 | 96.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:52:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20815415..20816176 | 771..10 | 3795 | 99.9 | Minus |
| 2L | 23513712 | 2L | 20815162..20815310 | 920..771 | 625 | 96 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:52:31 has no hits.
FMO13850.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-10-14 12:24:15 Download gff for
FMO13850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33322-RA | 57..1157 | 1..1107 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:50:56 Download gff for
FMO13850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33322-RA | 57..1157 | 1..1107 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:50:56 Download gff for
FMO13850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20815138..20815310 | 771..942 | 94 | <- | Minus |
| 2L | 20815416..20816184 | 1..770 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-10-14 12:24:15 Download gff for
FMO13850.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20815138..20815310 | 771..942 | 94 | <- | Minus |
| arm_2L | 20815416..20816184 | 1..770 | 99 | | Minus |
